Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC103988.1-201ENST00000566382 2177 ntBASIC3.32□□□□□ -1.88
RPRD1AQ96P16 AC130650.2-201ENST00000618736 2403 ntBASIC3.32□□□□□ -1.88
RPRD1AQ96P16 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 RNA5SP258-201ENST00000362750 119 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 DYNLT3P1-201ENST00000378574 347 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 RNU6-730P-201ENST00000383954 104 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 U6.112-201ENST00000384129 70 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 GSTA8P-201ENST00000404253 637 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 RNA5SP129-201ENST00000410276 118 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 RNU4-47P-201ENST00000410876 114 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 NDUFB4P5-201ENST00000415445 361 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 AC006548.1-201ENST00000427470 102 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 AL353705.1-201ENST00000433468 480 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 RPS3AP12-201ENST00000443616 753 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 HMGN1P18-201ENST00000457642 277 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 RN7SL863P-201ENST00000462370 296 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 AC010401.1-201ENST00000463867 348 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 AC087312.1-201ENST00000471411 480 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 RN7SL504P-201ENST00000494496 287 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 AC008628.1-201ENST00000508663 265 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 MTCYBP37-201ENST00000510642 1133 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 SNORA70.24-201ENST00000517233 118 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 AC011602.1-201ENST00000546484 331 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 MIR2682-201ENST00000580305 110 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 AC103881.1-201ENST00000603476 538 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 AP005229.2-201ENST00000609980 697 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 CR381572.1-201ENST00000625098 102 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 MIR3651-201ENST00000630427 90 ntBASIC3.31□□□□□ -1.88
RPRD1AQ96P16 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.31□□□□□ -1.88
RPRD1AQ96P16 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 RNVU1-3-201ENST00000364313 161 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 DEFB109C-201ENST00000382575 264 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 DEFB109B-201ENST00000382656 264 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 MTCO2P31-201ENST00000402702 684 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AL121978.1-201ENST00000402778 359 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AL139098.1-201ENST00000407291 389 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 RNU4-65P-201ENST00000410473 140 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 BX890604.2-201ENST00000427883 474 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 RPL31P54-201ENST00000429803 370 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 RPL23AP69-201ENST00000431134 458 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AC009969.1-201ENST00000438726 172 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 HSPE1P28-201ENST00000443139 211 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AC017099.1-201ENST00000448261 1028 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AC093392.2-201ENST00000450682 337 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 RPL21P18-201ENST00000469899 480 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AC118282.2-201ENST00000508739 374 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AC048346.1-201ENST00000510247 144 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 XIAPP1-201ENST00000603162 600 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AC002487.1-201ENST00000604565 994 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 YPEL5P2-201ENST00000605553 359 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AC004832.5-201ENST00000608677 401 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 uc_338.25-201ENST00000613756 156 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AC073968.1-201ENST00000618594 637 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AC091903.1-201ENST00000624322 454 ntBASIC3.3□□□□□ -1.88
RPRD1AQ96P16 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms