Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 RPL21P126-201ENST00000470049 478 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 RPL32P9-201ENST00000487963 407 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 RPL9P6-201ENST00000492764 598 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC016065.2-201ENST00000514530 444 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 RNA5SP216-201ENST00000516111 123 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 RNU6-718P-201ENST00000516166 105 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 RNU6-506P-201ENST00000516553 94 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 RNA5SP143-201ENST00000516936 115 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 AP001922.4-201ENST00000526967 290 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC022878.1-201ENST00000530684 149 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 LSM6P2-201ENST00000552208 177 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC136619.2-201ENST00000563361 631 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 OR4G1P-201ENST00000588632 938 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC112191.3-201ENST00000604371 277 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 AL161729.4-201ENST00000604650 476 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC131902.3-201ENST00000611767 581 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC008250.2-201ENST00000615261 205 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 U6atac.1-201ENST00000616025 117 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00479Q96M42 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00479Q96M42 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00479Q96M42 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00479Q96M42 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00479Q96M42 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00479Q96M42 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
LINC00479Q96M42 AC130650.2-201ENST00000618736 2403 ntBASIC3.17□□□□□ -1.9
LINC00479Q96M42 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 AP002001.2-201ENST00000529025 1469 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 LINC00561-201ENST00000565815 2738 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 CCT4P2-201ENST00000233836 1548 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC00479Q96M42 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 RNA5SP87-201ENST00000384155 118 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 MIR298-201ENST00000401212 88 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 RN7SKP266-201ENST00000410232 287 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 Y_RNA.604-201ENST00000410574 102 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 Y_RNA.608-201ENST00000410647 95 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 AC069218.2-201ENST00000411665 344 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 RPS3AP3-201ENST00000411933 242 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 OR8G2P-201ENST00000412796 908 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 AC096632.1-201ENST00000427395 310 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 OR4F13P-201ENST00000428478 931 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 AL596276.1-201ENST00000434465 418 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 SNRPEP7-201ENST00000438350 220 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 AP000542.1-201ENST00000448473 371 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 PAXBP1P1-201ENST00000449315 447 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 USP9YP34-201ENST00000453983 808 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 Z82190.1-201ENST00000454534 490 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 RPL23AP81-201ENST00000455252 467 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 PLGLA-201ENST00000465668 449 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 S100A11P1-201ENST00000477525 312 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 ACTR3P3-201ENST00000480448 893 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 AC012170.1-201ENST00000495139 359 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC00479Q96M42 AC105252.1-201ENST00000503089 286 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 AC020593.1-201ENST00000507399 299 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 AC110792.2-201ENST00000510278 224 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 OR7H2P-201ENST00000513483 306 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 AC010342.1-201ENST00000514047 877 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 SNORA18.6-201ENST00000516792 115 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 COX6CP8-201ENST00000522620 226 ntBASIC3.16□□□□□ -1.9
LINC00479Q96M42 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC00479Q96M42 OR5AP1P-201ENST00000529730 940 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms