Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC016065.2-201ENST00000514530 444 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 AC021678.3-201ENST00000517893 476 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 AL049779.2-201ENST00000553847 315 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 AC096996.1-201ENST00000563813 325 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 MIR4505-201ENST00000582238 73 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 FO393422.1-201ENST00000603908 708 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 NUTF2P8-201ENST00000604593 363 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 MIR6826-201ENST00000617808 98 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 AC103705.1-201ENST00000619013 241 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 AC097461.1-201ENST00000568928 2821 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 TPTE2P4-201ENST00000258589 1605 ntBASIC5.8□□□□□ -1.48
IFT43Q96FT9 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
IFT43Q96FT9 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
IFT43Q96FT9 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
IFT43Q96FT9 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
IFT43Q96FT9 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
IFT43Q96FT9 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 RN7SKP185-201ENST00000362813 326 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 RNA5SP132-201ENST00000364725 118 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 U3.29-201ENST00000391296 212 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 SOD2P1-201ENST00000396543 562 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 RAC1P6-201ENST00000423911 575 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 AC019185.1-201ENST00000442718 389 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 RPS17P13-201ENST00000448974 407 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 AL583843.1-201ENST00000456070 346 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 RPL21P93-201ENST00000480465 489 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 HMGB1P30-201ENST00000492455 606 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 RN7SL466P-201ENST00000497546 295 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 RNU6-189P-201ENST00000516120 101 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 IGLVIV-53-201ENST00000520107 367 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 AC135001.1-201ENST00000544546 283 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 AC126615.2-201ENST00000553003 515 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 AC104695.2-201ENST00000605056 775 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 AL162373.1-201ENST00000620433 407 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
IFT43Q96FT9 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
IFT43Q96FT9 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 ABCC13-202ENST00000463099 3842 ntBASIC5.79□□□□□ -1.48
IFT43Q96FT9 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
IFT43Q96FT9 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
IFT43Q96FT9 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
IFT43Q96FT9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
IFT43Q96FT9 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
IFT43Q96FT9 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
IFT43Q96FT9 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
IFT43Q96FT9 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
IFT43Q96FT9 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
IFT43Q96FT9 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
IFT43Q96FT9 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
IFT43Q96FT9 SNORA64.1-201ENST00000362600 132 ntBASIC5.78□□□□□ -1.48
IFT43Q96FT9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
IFT43Q96FT9 MIR130A-201ENST00000385274 89 ntBASIC5.78□□□□□ -1.48
IFT43Q96FT9 HMGB1P20-201ENST00000402555 677 ntBASIC5.78□□□□□ -1.48
IFT43Q96FT9 Y_RNA.646-201ENST00000410980 101 ntBASIC5.78□□□□□ -1.48
IFT43Q96FT9 RNU6-387P-201ENST00000411331 105 ntBASIC5.78□□□□□ -1.48
IFT43Q96FT9 RNU6-516P-201ENST00000411381 104 ntBASIC5.78□□□□□ -1.48
IFT43Q96FT9 RPL31P2-201ENST00000413849 377 ntBASIC5.78□□□□□ -1.48
IFT43Q96FT9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.78□□□□□ -1.48
IFT43Q96FT9 ATG3P1-201ENST00000419507 911 ntBASIC5.78□□□□□ -1.48
IFT43Q96FT9 GNG5P5-201ENST00000420444 220 ntBASIC5.78□□□□□ -1.48
IFT43Q96FT9 AC096644.2-201ENST00000429278 159 ntBASIC5.78□□□□□ -1.48
IFT43Q96FT9 HMGB3P24-201ENST00000433260 622 ntBASIC5.78□□□□□ -1.48
IFT43Q96FT9 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
IFT43Q96FT9 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.78□□□□□ -1.48
IFT43Q96FT9 GAPDHP48-201ENST00000436626 961 ntBASIC5.78□□□□□ -1.48
IFT43Q96FT9 RPL35AP22-201ENST00000436855 335 ntBASIC5.78□□□□□ -1.48
IFT43Q96FT9 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.78□□□□□ -1.48
IFT43Q96FT9 RPL23AP89-201ENST00000439324 255 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms