Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SKA1Q96BD8 BDH2P1-201ENST00000602288 736 ntBASIC4.17□□□□□ -1.74
SKA1Q96BD8 AL606490.9-201ENST00000603331 271 ntBASIC4.17□□□□□ -1.74
SKA1Q96BD8 AC011451.2-201ENST00000604303 598 ntBASIC4.17□□□□□ -1.74
SKA1Q96BD8 AP003392.5-201ENST00000607857 415 ntBASIC4.17□□□□□ -1.74
SKA1Q96BD8 AP000240.1-201ENST00000609910 452 ntBASIC4.17□□□□□ -1.74
SKA1Q96BD8 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
SKA1Q96BD8 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SKA1Q96BD8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SKA1Q96BD8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SKA1Q96BD8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SKA1Q96BD8 AC010733.2-201ENST00000589496 5702 ntBASIC4.17□□□□□ -1.74
SKA1Q96BD8 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SKA1Q96BD8 AL136164.4-201ENST00000625013 2135 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 HSPA8P1-201ENST00000425843 1833 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SKA1Q96BD8 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SKA1Q96BD8 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 Z82217.1-201ENST00000625157 8149 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 OR11H4-201ENST00000315409 1082 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SKA1Q96BD8 RNU11-4P-201ENST00000391149 133 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 PTMAP2-201ENST00000397627 327 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 RNU2-43P-201ENST00000410306 190 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 RPS15AP38-201ENST00000413110 372 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 RABEPKP1-201ENST00000440529 1026 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 MTND5P14-201ENST00000441481 1267 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 AC002381.1-201ENST00000447049 280 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 AC234775.1-201ENST00000454247 670 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 VN1R105P-201ENST00000486595 910 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 AC091951.3-201ENST00000504093 246 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 AC104090.1-201ENST00000506341 1171 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 NPM1P41-201ENST00000512920 831 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 AP001804.3-201ENST00000525146 880 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 AC023050.2-201ENST00000544968 387 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 AC112220.3-201ENST00000605502 502 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 AL110115.1-201ENST00000614396 364 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SKA1Q96BD8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 ZNF876P-202ENST00000398732 1485 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 BDP1P-201ENST00000582658 1990 ntBASIC4.16□□□□□ -1.74
SKA1Q96BD8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SKA1Q96BD8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SKA1Q96BD8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SKA1Q96BD8 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SKA1Q96BD8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.15□□□□□ -1.74
SKA1Q96BD8 AL353746.1-201ENST00000566293 6881 ntBASIC4.15□□□□□ -1.74
SKA1Q96BD8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SKA1Q96BD8 SNORA60-201ENST00000362396 134 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 MIR135A2-201ENST00000384854 100 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 MIR200C-201ENST00000384980 68 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 AL591034.1-201ENST00000407447 340 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 YPEL5P1-201ENST00000419731 367 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 RAC1P7-201ENST00000445367 377 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 Z73417.1-201ENST00000447373 778 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 PAXBP1P1-201ENST00000449315 447 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 RPL7P15-201ENST00000461190 712 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 AC017015.1-201ENST00000477387 286 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 AC069499.1-201ENST00000489433 509 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 VN1R104P-201ENST00000505115 1009 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 AC024589.1-201ENST00000512207 263 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 AC093677.1-201ENST00000514414 678 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 RNU5A-4P-201ENST00000516588 111 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 RNU1-45P-201ENST00000517191 141 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 IGKV2-38-201ENST00000517443 247 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 MED28P6-201ENST00000558776 231 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms