Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 RPL7P37-201ENST00000425095 738 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 RPL7P46-201ENST00000425129 740 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AL360081.1-201ENST00000428299 555 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC073069.1-201ENST00000428657 441 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC108734.1-201ENST00000439549 399 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AP000893.1-201ENST00000474462 794 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC107393.1-201ENST00000512403 346 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 RPS27AP18-201ENST00000515536 459 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 RNU6-1069P-201ENST00000516612 133 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 IGKV2-38-201ENST00000517443 247 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 HMGB1P42-201ENST00000532126 553 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC245517.5-201ENST00000611529 162 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AL049539.1-201ENST00000611964 459 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC005344.1-201ENST00000613391 459 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 U2.14-201ENST00000615943 113 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC241377.1-201ENST00000619797 406 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC055839.1-201ENST00000634467 498 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC073869.10-201ENST00000642016 354 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC011460.1-201ENST00000636268 1834 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 LINC02019-201ENST00000608605 2060 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC104964.3-201ENST00000606115 2860 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 RNU6-682P-201ENST00000363843 106 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 Y_RNA.269-201ENST00000364685 89 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 RNA5SP30-201ENST00000365552 115 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 RNU6-22P-201ENST00000384355 107 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 RNU6-95P-201ENST00000384697 107 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 AC009804.1-201ENST00000400949 179 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 AL603910.2-201ENST00000407268 136 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 RN7SKP213-201ENST00000410746 298 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 AC108059.3-201ENST00000456388 214 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 MTCO3P2-201ENST00000457365 171 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 SCARNA18-201ENST00000459004 134 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 RN7SL72P-201ENST00000460697 269 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 RN7SL583P-201ENST00000475692 287 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 UBA52P3-201ENST00000491303 382 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 AC105758.1-201ENST00000506038 399 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 RNU6-488P-201ENST00000515918 99 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 RNU7-200P-201ENST00000516105 62 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 RNA5SP228-201ENST00000516232 133 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 RNU6-62P-201ENST00000516526 102 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 AC087441.2-201ENST00000529141 262 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 AC090115.3-201ENST00000553218 849 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 AC006115.2-201ENST00000596823 202 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 AC074029.4-201ENST00000624796 1859 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 RBPJP2-201ENST00000618187 1444 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 LCOR-201ENST00000286067 4542 ntBASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC6.74□□□□□ -1.33
NKX2-3Q8TAU0 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 AC138907.8-201ENST00000623981 2256 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 AL391987.6-201ENST00000305671 199 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 RNU6-1287P-201ENST00000362914 107 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 RNA5SP131-201ENST00000365452 119 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 RNU6-1060P-201ENST00000384664 107 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms