Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC090617.10-201ENST00000624308 134 ntBASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM48Q8IWZ4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AL672167.1-204ENST00000641875 3017 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 FRG1CP-201ENST00000358464 769 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 Y_RNA.67-201ENST00000362870 100 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AL365400.1-201ENST00000431854 640 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 UBE2V1P13-201ENST00000436983 439 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC108734.1-201ENST00000439549 399 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC079781.2-201ENST00000446424 169 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC010733.1-201ENST00000451515 401 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 NANOGP10-201ENST00000453325 895 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC104308.1-201ENST00000454621 333 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC022034.3-201ENST00000471393 478 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 SNORD60.2-201ENST00000516883 86 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC027369.5-201ENST00000533838 755 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC006349.1-201ENST00000555526 235 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC040958.1-201ENST00000561102 201 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC124068.1-201ENST00000563131 678 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC018552.3-201ENST00000567416 561 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AL355375.2-201ENST00000574825 175 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AP001029.3-201ENST00000588063 596 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 KC877982.1-201ENST00000602313 470 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 OR6R2P-201ENST00000609216 300 ntBASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
TRIM48Q8IWZ4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.84□□□□□ -1.64
TRIM48Q8IWZ4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
TRIM48Q8IWZ4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.84□□□□□ -1.64
TRIM48Q8IWZ4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.84□□□□□ -1.64
TRIM48Q8IWZ4 AC100778.3-201ENST00000580060 1750 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 MTCO1P7-201ENST00000419523 1542 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 Y_RNA.166-201ENST00000363730 102 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 Y_RNA.255-201ENST00000364581 97 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 RNU6-996P-201ENST00000365438 107 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AL136116.1-201ENST00000403591 381 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AL049697.2-201ENST00000403708 294 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 RNU2-15P-201ENST00000410692 191 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 RNU6-1148P-201ENST00000410992 104 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 RPL37P18-201ENST00000411602 243 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AL354751.2-201ENST00000415471 210 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 MTCYBP8-201ENST00000422855 651 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms