Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC009501.3-201ENST00000605001 1352 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC096644.4-201ENST00000563417 2912 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC092447.7-201ENST00000422212 1621 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMARCD3Q6STE5 SNORA38.1-201ENST00000364172 131 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 RNU6-883P-201ENST00000384597 107 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMARCD3Q6STE5 USP9YP19-201ENST00000412165 485 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 ATG3P1-201ENST00000419507 911 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 snoU13.24-201ENST00000458998 104 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 RPS27AP9-201ENST00000477681 438 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC025459.1-201ENST00000504072 156 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 HMGB1P22-201ENST00000505315 124 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC111000.2-201ENST00000507775 550 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC004062.1-201ENST00000509926 645 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC093770.1-201ENST00000511559 571 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 MTND2P31-201ENST00000512602 616 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC016065.2-201ENST00000514530 444 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC022690.1-201ENST00000526681 550 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMARCD3Q6STE5 HSPE1P20-201ENST00000538133 289 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 NOP56P3-201ENST00000549457 385 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC090751.1-201ENST00000566966 267 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 MIR3605-201ENST00000583214 100 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 YPEL5P2-201ENST00000605553 359 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC096577.2-201ENST00000611455 153 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 AL359198.2-201ENST00000611836 194 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 ZNF37BP-203ENST00000452306 1352 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC073346.2-201ENST00000624724 2058 ntBASIC2.57□□□□□ -2
SMARCD3Q6STE5 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
SMARCD3Q6STE5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SMARCD3Q6STE5 AC092593.1-201ENST00000515413 1815 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMARCD3Q6STE5 MIR26A1-201ENST00000362205 77 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.56□□□□□ -2
SMARCD3Q6STE5 Z86062.1-201ENST00000406773 777 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 RAP1BP1-201ENST00000412709 553 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.56□□□□□ -2
SMARCD3Q6STE5 MTATP6P4-201ENST00000427725 675 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 AC006946.1-201ENST00000429106 328 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 UBE2V1P1-201ENST00000430836 445 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMARCD3Q6STE5 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.56□□□□□ -2
SMARCD3Q6STE5 UBBP3-201ENST00000445497 241 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 HMGB1P48-201ENST00000446155 598 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.56□□□□□ -2
SMARCD3Q6STE5 MTND5P8-201ENST00000449817 1083 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 NPM1P13-201ENST00000452663 865 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.56□□□□□ -2
SMARCD3Q6STE5 AC104689.1-201ENST00000473356 768 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SMARCD3Q6STE5 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.56□□□□□ -2
SMARCD3Q6STE5 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.56□□□□□ -2
SMARCD3Q6STE5 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.56□□□□□ -2
SMARCD3Q6STE5 SCGB1D5P-201ENST00000515134 247 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.56□□□□□ -2
SMARCD3Q6STE5 AC087272.1-201ENST00000523624 533 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.56□□□□□ -2
SMARCD3Q6STE5 AP002404.1-201ENST00000532005 451 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 ELOCP31-201ENST00000540463 467 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.56□□□□□ -2
SMARCD3Q6STE5 H3F3AP1-201ENST00000559984 334 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 AADACP1-206ENST00000561502 1193 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SMARCD3Q6STE5 AC006539.2-201ENST00000601729 572 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 MTCO3P22-201ENST00000603219 784 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 CYCSP41-201ENST00000616920 296 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 AC006963.1-201ENST00000624003 1052 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.56□□□□□ -2
SMARCD3Q6STE5 FRG1DP-201ENST00000635586 771 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SMARCD3Q6STE5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.56□□□□□ -2
SMARCD3Q6STE5 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.56□□□□□ -2
SMARCD3Q6STE5 FAM35BP-202ENST00000497389 3337 ntBASIC2.56□□□□□ -2
SMARCD3Q6STE5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.56□□□□□ -2
SMARCD3Q6STE5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.55□□□□□ -2
SMARCD3Q6STE5 AC000403.1-201ENST00000613696 3585 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 MIR208A-201ENST00000362287 71 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SMARCD3Q6STE5 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.55□□□□□ -2
SMARCD3Q6STE5 RNU6-1027P-201ENST00000383998 107 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AL512633.1-201ENST00000399931 655 ntBASIC2.55□□□□□ -2
SMARCD3Q6STE5 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms