Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC007224.1-201ENST00000564410 144 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AC093519.1-201ENST00000566109 298 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 TPMTP1-201ENST00000592307 737 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AC006006.1-201ENST00000603082 144 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AC011373.1-201ENST00000607270 237 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 DISC2.1-201ENST00000612827 205 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 OR14L1P-202ENST00000641545 3009 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AC125257.1-201ENST00000560400 2930 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 SNORA33.2-201ENST00000365413 134 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 Y_RNA.459-201ENST00000384251 102 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 RNU6-178P-201ENST00000384631 104 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 MIR506-201ENST00000384998 124 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 RPS20P2-201ENST00000402520 389 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 MIR1305-201ENST00000408300 86 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AC073264.1-201ENST00000411508 416 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 GPS2P1-201ENST00000411761 986 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 MTATP6P18-201ENST00000417994 673 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 NCOR1P3-201ENST00000420479 303 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AC092162.1-201ENST00000432828 434 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AC239809.1-201ENST00000450470 217 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 RNA5SP401-201ENST00000515920 127 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 RNU6-1003P-201ENST00000517099 105 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 SCOCP1-201ENST00000554676 349 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AC004853.1-201ENST00000604902 698 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AC090948.1-201ENST00000607464 549 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AL132822.1-201ENST00000617063 513 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 7SK.10-201ENST00000621414 298 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 U3.53-201ENST00000628922 216 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 PHKBP1-201ENST00000450951 1951 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 AC107027.3-201ENST00000565095 3473 ntBASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNKSR3Q6P9H4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 MIR369-201ENST00000362155 70 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 Y_RNA.133-201ENST00000363428 110 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 Y_RNA.315-201ENST00000365117 102 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 RNU6-43P-201ENST00000384302 107 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 MIR320C1-201ENST00000408566 88 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 RN7SKP266-201ENST00000410232 287 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 SNRPFP1-201ENST00000414761 252 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AL356387.2-201ENST00000422272 243 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 RPS27AP12-201ENST00000429552 465 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AC236972.2-201ENST00000434979 310 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 RPS27AP15-201ENST00000447672 466 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 CYCSP34-201ENST00000458172 304 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms