Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL118556.2-201ENST00000614375 824 ntBASIC3□□□□□ -1.93
H3F3CQ6NXT2 AC107308.1-201ENST00000615897 301 ntBASIC3□□□□□ -1.93
H3F3CQ6NXT2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3□□□□□ -1.93
H3F3CQ6NXT2 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3□□□□□ -1.93
H3F3CQ6NXT2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
H3F3CQ6NXT2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3□□□□□ -1.93
H3F3CQ6NXT2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
H3F3CQ6NXT2 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
H3F3CQ6NXT2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
H3F3CQ6NXT2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC110774.1-201ENST00000623567 2018 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 RNU6-650P-201ENST00000365658 111 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 MTND4LP20-201ENST00000402379 270 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 GSTA8P-201ENST00000404253 637 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 RNA5SP229-201ENST00000410809 99 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 MRPL50P2-201ENST00000416821 482 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 HSPE1P1-201ENST00000421494 318 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 FAM204CP-201ENST00000424489 642 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 SNRPEP4-201ENST00000435815 279 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AL590762.3-201ENST00000436372 640 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 RNFT1P2-201ENST00000443064 757 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC005002.1-201ENST00000447458 540 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 RPL36AP33-201ENST00000450395 310 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC104073.1-201ENST00000451988 151 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 S100A11P2-201ENST00000467589 312 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 SETP6-201ENST00000479329 568 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 GAPDHP39-201ENST00000481866 979 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC006483.1-201ENST00000487308 313 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC010468.3-201ENST00000508225 458 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC022690.1-201ENST00000526681 550 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 MIR4325-201ENST00000583049 90 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AL451074.6-201ENST00000608512 729 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC006329.2-201ENST00000611491 394 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC006111.3-201ENST00000622137 383 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC018692.3-201ENST00000623929 123 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC026422.1-201ENST00000623961 452 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 AC098679.5-201ENST00000624394 571 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
H3F3CQ6NXT2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 ZNF833P-201ENST00000424938 1494 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 SNORA7.4-201ENST00000384249 137 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 SNORA48.5-201ENST00000391143 135 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 RPS3AP26-201ENST00000398259 784 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 RNU6-1077P-201ENST00000410506 102 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 Z92545.1-201ENST00000411782 234 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AC012498.1-201ENST00000424037 437 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 VN1R42P-201ENST00000424651 344 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AC009969.1-201ENST00000438726 172 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AC127537.2-201ENST00000439258 465 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 TRIM60P18-201ENST00000441518 828 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AL445669.2-201ENST00000454425 421 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AP001992.1-205ENST00000462248 379 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 RPL27AP5-201ENST00000469428 449 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 SNORA64.4-201ENST00000516632 81 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 HMGB1P1-201ENST00000522557 636 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AC126177.3-201ENST00000551839 688 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 LINC00557-201ENST00000563184 1279 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 BDH2P1-201ENST00000602288 736 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AP001330.4-201ENST00000604350 154 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AP004247.3-201ENST00000608682 624 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AC105227.2-201ENST00000615075 605 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AC002076.2-201ENST00000617362 122 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 AC090897.3-201ENST00000636973 1157 ntBASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.98□□□□□ -1.93
H3F3CQ6NXT2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms