Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 BRWD1P3-201ENST00000428816 390 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AL591212.2-201ENST00000433923 257 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AL390119.1-201ENST00000440329 312 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 RPS26P56-201ENST00000444468 240 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AC090804.1-201ENST00000448870 490 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 RNU6-1218P-201ENST00000458990 108 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AC098976.1-201ENST00000513014 541 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AC093853.1-201ENST00000515689 483 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 SNORA25.10-201ENST00000515926 124 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 Y_RNA.661-201ENST00000516003 99 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AP004607.2-201ENST00000533949 322 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AC027544.3-201ENST00000535082 757 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 MTCO3P23-201ENST00000561363 289 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 COX6CP3-201ENST00000580869 223 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AC092747.3-201ENST00000603769 301 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 DUSP12P1-201ENST00000612874 516 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AL596245.1-201ENST00000618994 362 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AL669831.3-213ENST00000636676 183 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AC121333.1-201ENST00000567488 2709 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AL353796.1-201ENST00000561542 3241 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AL031595.2-201ENST00000624215 19071 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 THAP12P4-201ENST00000528321 2266 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 RN7SKP124-201ENST00000364730 341 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 Y_RNA.364-201ENST00000365532 101 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 OR1L6-202ENST00000373684 1044 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 SNORD3H-201ENST00000384486 214 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 RNU6-278P-201ENST00000390945 109 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 RNA5SP487-201ENST00000410186 122 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 RNU6-847P-201ENST00000411115 108 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 GSTM3P2-201ENST00000412746 530 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 RPL6P29-201ENST00000414863 865 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AC018865.2-201ENST00000423631 129 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AL161722.1-201ENST00000446972 1032 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AL031584.1-201ENST00000447169 754 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AC010655.3-201ENST00000478818 450 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 SIAH1P1-201ENST00000479411 923 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 RPS27AP18-201ENST00000515536 459 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 DEFB109D-201ENST00000529497 240 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 BNIP3P16-201ENST00000589779 534 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AL109918.3-201ENST00000603072 338 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AC104695.2-201ENST00000605056 775 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AC000068.2-201ENST00000608816 460 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 HMGB1P24-202ENST00000615653 685 ntBASIC6.4□□□□□ -1.38
RNF20Q5VTR2 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF20Q5VTR2 AC006484.1-201ENST00000435086 1884 ntBASIC6.4□□□□□ -1.39
RNF20Q5VTR2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RNF20Q5VTR2 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RNF20Q5VTR2 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
RNF20Q5VTR2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
RNF20Q5VTR2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
RNF20Q5VTR2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
RNF20Q5VTR2 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.4□□□□□ -1.39
RNF20Q5VTR2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF20Q5VTR2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF20Q5VTR2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms