Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC006065.6-201ENST00000625201 545 ntBASIC4.32□□□□□ -1.72
PTCHD3Q3KNS1 MIR6830-201ENST00000636015 70 ntBASIC4.32□□□□□ -1.72
PTCHD3Q3KNS1 OR52H1-202ENST00000641796 1061 ntBASIC4.32□□□□□ -1.72
PTCHD3Q3KNS1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCHD3Q3KNS1 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCHD3Q3KNS1 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.32□□□□□ -1.72
PTCHD3Q3KNS1 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCHD3Q3KNS1 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCHD3Q3KNS1 AL359893.1-201ENST00000447628 1580 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 PABPC1P7-201ENST00000413177 1513 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 OR4G2P-201ENST00000328113 903 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 RNU6-853P-201ENST00000364306 107 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 RNVU1-3-201ENST00000364313 161 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 SNORA70.2-201ENST00000364506 135 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 RNA5SP509-201ENST00000364577 119 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 RNA5SP22-201ENST00000365393 109 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 MIR181A1-201ENST00000385026 110 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 HDGFP1-201ENST00000405943 252 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 SNORA74C-2-201ENST00000411179 201 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AL353777.1-201ENST00000425552 326 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 IFNWP4-201ENST00000453148 294 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 RPL23AP24-201ENST00000458203 385 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 RPL9P6-201ENST00000492764 598 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC015795.1-201ENST00000513669 327 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AP003122.4-201ENST00000530980 758 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC087883.1-201ENST00000551882 391 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 SETP2-201ENST00000553886 926 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC068446.3-201ENST00000555285 382 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 PARP1P2-201ENST00000556806 195 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AL157394.1-201ENST00000562983 1224 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC034268.2-201ENST00000571784 482 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 MIR3913-1-201ENST00000577744 102 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC023575.1-201ENST00000580510 358 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 Z98200.1-201ENST00000607298 470 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC098614.4-201ENST00000607601 462 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC126118.1-201ENST00000607744 628 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC136475.10-201ENST00000620253 385 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC138649.3-201ENST00000622154 254 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC011944.2-201ENST00000624440 683 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AL139811.1-201ENST00000424779 2299 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC012020.1-201ENST00000624541 1728 ntBASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PTCHD3Q3KNS1 AC095050.2-201ENST00000510748 1458 ntBASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 FCF1P10-201ENST00000407590 479 ntBASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 RPS20P14-201ENST00000412545 360 ntBASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 SNRPFP1-201ENST00000414761 252 ntBASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 TMSB10P2-201ENST00000416049 131 ntBASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 SPA17P1-201ENST00000416656 452 ntBASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 AC108734.1-201ENST00000439549 399 ntBASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 RPL7P52-201ENST00000449200 742 ntBASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 RPL7AP28-201ENST00000464513 571 ntBASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 RPS3AP17-201ENST00000472594 777 ntBASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 AC006390.1-201ENST00000508068 283 ntBASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 RN7SKP122-201ENST00000515923 296 ntBASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 MED28P5-201ENST00000528254 438 ntBASIC4.3□□□□□ -1.72
PTCHD3Q3KNS1 PTP4A1P6-201ENST00000531034 478 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms