Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 RPL7P46-201ENST00000425129 740 ntBASIC2.43□□□□□ -2.02
FOXF1Q12946 AC091390.3-201ENST00000426478 338 ntBASIC2.43□□□□□ -2.02
FOXF1Q12946 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXF1Q12946 AC073508.1-201ENST00000428866 656 ntBASIC2.43□□□□□ -2.02
FOXF1Q12946 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXF1Q12946 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
FOXF1Q12946 AC025181.1-201ENST00000477507 416 ntBASIC2.43□□□□□ -2.02
FOXF1Q12946 OR9N1P-202ENST00000494289 481 ntBASIC2.43□□□□□ -2.02
FOXF1Q12946 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXF1Q12946 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXF1Q12946 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXF1Q12946 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.43□□□□□ -2.02
FOXF1Q12946 AC034159.1-201ENST00000513885 583 ntBASIC2.43□□□□□ -2.02
FOXF1Q12946 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
FOXF1Q12946 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXF1Q12946 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXF1Q12946 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXF1Q12946 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXF1Q12946 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXF1Q12946 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXF1Q12946 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.43□□□□□ -2.02
FOXF1Q12946 AC079610.2-201ENST00000604818 690 ntBASIC2.43□□□□□ -2.02
FOXF1Q12946 AC245100.7-201ENST00000609678 442 ntBASIC2.43□□□□□ -2.02
FOXF1Q12946 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
FOXF1Q12946 CR381653.2-201ENST00000624041 768 ntBASIC2.43□□□□□ -2.02
FOXF1Q12946 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXF1Q12946 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
FOXF1Q12946 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.43□□□□□ -2.02
FOXF1Q12946 NSRP1P1-201ENST00000444067 1693 ntBASIC2.43□□□□□ -2.02
FOXF1Q12946 AC006378.2-201ENST00000623178 2476 ntBASIC2.43□□□□□ -2.02
FOXF1Q12946 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.43□□□□□ -2.02
FOXF1Q12946 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXF1Q12946 MTND4P34-201ENST00000572715 1371 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 SNORA7.2-201ENST00000364446 145 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 SNORD115-48-201ENST00000364764 76 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 MIR607-201ENST00000385241 96 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 AL356057.3-201ENST00000402607 340 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 RNU2-21P-201ENST00000410368 188 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.42□□□□□ -2.02
FOXF1Q12946 LINC01347-201ENST00000417964 355 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 RPS15AP40-201ENST00000419621 391 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 HSFY1P1-201ENST00000423928 1178 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 AL513175.1-201ENST00000431492 780 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 CKS1BP5-201ENST00000434172 273 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.42□□□□□ -2.02
FOXF1Q12946 RPL7P59-201ENST00000447700 943 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 AC092685.1-201ENST00000447960 1243 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 NPM1P49-201ENST00000448027 714 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 SNORD109B-201ENST00000458961 67 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 SNORD109A-201ENST00000459128 67 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 AC103975.1-201ENST00000482506 483 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.42□□□□□ -2.02
FOXF1Q12946 VN1R104P-201ENST00000505115 1009 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXF1Q12946 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXF1Q12946 RNA5SP356-201ENST00000515972 94 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 SNORA48.9-201ENST00000516419 162 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 SNORA31.13-201ENST00000516624 135 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 RN7SKP277-201ENST00000516895 283 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXF1Q12946 NOP56P3-201ENST00000549457 385 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.42□□□□□ -2.02
FOXF1Q12946 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXF1Q12946 AC090616.5-202ENST00000582111 297 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXF1Q12946 VN1R92P-201ENST00000598511 928 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 AL133393.1-201ENST00000603277 287 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 AP000787.2-201ENST00000604432 568 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 BX322635.1-201ENST00000605804 496 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 AL359198.2-201ENST00000611836 194 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 FRG1DP-201ENST00000635586 771 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
FOXF1Q12946 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.42□□□□□ -2.02
FOXF1Q12946 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
FOXF1Q12946 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
FOXF1Q12946 AC109315.1-201ENST00000584143 1347 ntBASIC2.42□□□□□ -2.02
FOXF1Q12946 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
FOXF1Q12946 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.41□□□□□ -2.02
FOXF1Q12946 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
FOXF1Q12946 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.41□□□□□ -2.02
FOXF1Q12946 RNU6-859P-201ENST00000362728 107 ntBASIC2.41□□□□□ -2.02
FOXF1Q12946 MIR9-1-201ENST00000385198 89 ntBASIC2.41□□□□□ -2.02
FOXF1Q12946 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
FOXF1Q12946 CR848007.2-201ENST00000424918 787 ntBASIC2.41□□□□□ -2.02
FOXF1Q12946 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.41□□□□□ -2.02
FOXF1Q12946 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.41□□□□□ -2.02
FOXF1Q12946 PSMA2P3-201ENST00000429685 675 ntBASIC2.41□□□□□ -2.02
FOXF1Q12946 RPL21P112-201ENST00000434403 463 ntBASIC2.41□□□□□ -2.02
FOXF1Q12946 RPL7P29-201ENST00000437151 728 ntBASIC2.41□□□□□ -2.02
FOXF1Q12946 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.41□□□□□ -2.02
FOXF1Q12946 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.41□□□□□ -2.02
FOXF1Q12946 AC093392.2-201ENST00000450682 337 ntBASIC2.41□□□□□ -2.02
FOXF1Q12946 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.41□□□□□ -2.02
FOXF1Q12946 BX276092.4-201ENST00000452056 248 ntBASIC2.41□□□□□ -2.02
FOXF1Q12946 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.41□□□□□ -2.02
FOXF1Q12946 RPL23AP31-201ENST00000456160 467 ntBASIC2.41□□□□□ -2.02
FOXF1Q12946 RPL21P104-201ENST00000464143 478 ntBASIC2.41□□□□□ -2.02
FOXF1Q12946 AC104689.1-201ENST00000473356 768 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms