Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXG1P55316 AC005191.1-201ENST00000603950 358 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXG1P55316 AC093788.1-201ENST00000609356 927 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 AC243654.2-201ENST00000612843 443 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 YWHAEP7-203ENST00000622054 312 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 AC091905.2-201ENST00000623143 306 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 ATE1-AS1-202ENST00000636460 506 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 LINC01355-201ENST00000566551 5444 ntBASIC3.89□□□□□ -1.79
FOXG1P55316 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXG1P55316 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
FOXG1P55316 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXG1P55316 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXG1P55316 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
FOXG1P55316 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
FOXG1P55316 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXG1P55316 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
FOXG1P55316 AC009229.4-201ENST00000623854 1947 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AL356489.2-201ENST00000566968 3528 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXG1P55316 OR5P1P-201ENST00000299512 925 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 RNU6-462P-201ENST00000362659 105 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 RNU6-492P-201ENST00000363035 104 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 RNU6-984P-201ENST00000363236 109 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 RNA5SP509-201ENST00000364577 119 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXG1P55316 RNU6-533P-201ENST00000384144 107 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 RNU6-809P-201ENST00000384461 107 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AL359643.1-201ENST00000404109 423 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 MIR1271-201ENST00000408537 86 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
FOXG1P55316 BOLA3P4-201ENST00000418151 400 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 ISCA1P6-201ENST00000427740 390 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 NPM1P34-201ENST00000428821 893 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 RPS29P17-201ENST00000430795 166 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AC002486.1-201ENST00000435098 391 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AL031663.1-201ENST00000437445 219 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 MTND6P13-201ENST00000443510 523 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXG1P55316 EIF4A1P11-201ENST00000451239 222 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXG1P55316 AC026979.1-201ENST00000492525 396 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXG1P55316 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXG1P55316 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
FOXG1P55316 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
FOXG1P55316 AC108064.1-201ENST00000513791 460 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 RNA5SP135-201ENST00000517019 125 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 RNU6-1261P-201ENST00000517194 104 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXG1P55316 AC022690.1-201ENST00000526681 550 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AC013828.2-201ENST00000532487 235 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 TRAV8-5-201ENST00000537369 341 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.88□□□□□ -1.79
FOXG1P55316 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXG1P55316 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXG1P55316 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXG1P55316 AL157394.1-201ENST00000562983 1224 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXG1P55316 BNIP3P23-201ENST00000599655 511 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AL360085.1-201ENST00000604713 532 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AL354984.3-201ENST00000604803 325 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AC010201.1-201ENST00000605051 540 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AC069304.2-201ENST00000605154 435 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXG1P55316 AC083809.1-201ENST00000615051 472 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AC009268.2-201ENST00000621925 457 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AC067931.1-201ENST00000624190 671 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AC091905.1-201ENST00000624400 311 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 AC116563.2-201ENST00000624751 535 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXG1P55316 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXG1P55316 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.88□□□□□ -1.79
FOXG1P55316 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXG1P55316 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXG1P55316 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXG1P55316 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXG1P55316 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXG1P55316 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXG1P55316 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXG1P55316 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXG1P55316 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXG1P55316 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
FOXG1P55316 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXG1P55316 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXG1P55316 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
FOXG1P55316 OR4A15-201ENST00000314706 1035 ntBASIC3.87□□□□□ -1.79
FOXG1P55316 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
FOXG1P55316 SUGT1P1-201ENST00000379514 476 ntBASIC3.87□□□□□ -1.79
FOXG1P55316 AC097374.1-203ENST00000400783 485 ntBASIC3.87□□□□□ -1.79
FOXG1P55316 AL359704.1-201ENST00000411586 781 ntBASIC3.87□□□□□ -1.79
FOXG1P55316 AL136133.1-201ENST00000413694 376 ntBASIC3.87□□□□□ -1.79
FOXG1P55316 AL953862.1-201ENST00000423016 168 ntBASIC3.87□□□□□ -1.79
FOXG1P55316 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXG1P55316 C4BPAP2-201ENST00000428434 478 ntBASIC3.87□□□□□ -1.79
FOXG1P55316 OR4F13P-201ENST00000428478 931 ntBASIC3.87□□□□□ -1.79
FOXG1P55316 RPS20P1-201ENST00000434853 354 ntBASIC3.87□□□□□ -1.79
FOXG1P55316 AL353597.2-202ENST00000434901 373 ntBASIC3.87□□□□□ -1.79
FOXG1P55316 AC009961.2-201ENST00000435771 251 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms