Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AL163540.1-201ENST00000485382 386 ntBASIC2.39□□□□□ -2.03
BRCA2P51587 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
BRCA2P51587 AC068339.2-201ENST00000534395 618 ntBASIC2.39□□□□□ -2.03
BRCA2P51587 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.39□□□□□ -2.03
BRCA2P51587 MIR6766-201ENST00000622641 72 ntBASIC2.39□□□□□ -2.03
BRCA2P51587 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.39□□□□□ -2.03
BRCA2P51587 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
BRCA2P51587 AL022311.1-201ENST00000623726 19416 ntBASIC2.39□□□□□ -2.03
BRCA2P51587 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
BRCA2P51587 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
BRCA2P51587 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
BRCA2P51587 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.38□□□□□ -2.03
BRCA2P51587 RPL21P134-201ENST00000453468 483 ntBASIC2.38□□□□□ -2.03
BRCA2P51587 SETP4-201ENST00000455717 868 ntBASIC2.38□□□□□ -2.03
BRCA2P51587 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.38□□□□□ -2.03
BRCA2P51587 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.38□□□□□ -2.03
BRCA2P51587 AC105137.2-201ENST00000569073 466 ntBASIC2.38□□□□□ -2.03
BRCA2P51587 MIR3683-201ENST00000580847 82 ntBASIC2.38□□□□□ -2.03
BRCA2P51587 MIR6895-201ENST00000613497 78 ntBASIC2.38□□□□□ -2.03
BRCA2P51587 AC009831.4-201ENST00000620744 325 ntBASIC2.38□□□□□ -2.03
BRCA2P51587 AC092628.2-201ENST00000622492 339 ntBASIC2.38□□□□□ -2.03
BRCA2P51587 AC026241.1-201ENST00000517873 2142 ntBASIC2.38□□□□□ -2.03
BRCA2P51587 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
BRCA2P51587 MIR21-201ENST00000362134 72 ntBASIC2.38□□□□□ -2.03
BRCA2P51587 RHEBP3-201ENST00000411920 351 ntBASIC2.38□□□□□ -2.03
BRCA2P51587 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.38□□□□□ -2.03
BRCA2P51587 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
BRCA2P51587 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
BRCA2P51587 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
BRCA2P51587 AC009237.2-201ENST00000421358 284 ntBASIC2.38□□□□□ -2.03
BRCA2P51587 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.38□□□□□ -2.03
BRCA2P51587 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.38□□□□□ -2.03
BRCA2P51587 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
BRCA2P51587 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.37□□□□□ -2.03
BRCA2P51587 OR4K11P-201ENST00000431829 904 ntBASIC2.37□□□□□ -2.03
BRCA2P51587 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2.37□□□□□ -2.03
BRCA2P51587 AP001207.1-201ENST00000524051 481 ntBASIC2.37□□□□□ -2.03
BRCA2P51587 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.37□□□□□ -2.03
BRCA2P51587 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
BRCA2P51587 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
BRCA2P51587 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
BRCA2P51587 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
BRCA2P51587 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
BRCA2P51587 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.37□□□□□ -2.03
BRCA2P51587 MIR9-3-201ENST00000385084 90 ntBASIC2.37□□□□□ -2.03
BRCA2P51587 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.37□□□□□ -2.03
BRCA2P51587 MTATP6P11-201ENST00000428071 670 ntBASIC2.37□□□□□ -2.03
BRCA2P51587 OR4A45P-201ENST00000529954 901 ntBASIC2.37□□□□□ -2.03
BRCA2P51587 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
BRCA2P51587 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
BRCA2P51587 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
BRCA2P51587 AC083843.2-201ENST00000568248 6253 ntBASIC2.36□□□□□ -2.03
BRCA2P51587 SNORA40.18-201ENST00000391200 128 ntBASIC2.36□□□□□ -2.03
BRCA2P51587 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.36□□□□□ -2.03
BRCA2P51587 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.36□□□□□ -2.03
BRCA2P51587 AL391813.2-201ENST00000609113 322 ntBASIC2.36□□□□□ -2.03
BRCA2P51587 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC2.36□□□□□ -2.03
BRCA2P51587 AC008121.2-201ENST00000614647 523 ntBASIC2.36□□□□□ -2.03
BRCA2P51587 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
BRCA2P51587 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
BRCA2P51587 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.36□□□□□ -2.03
BRCA2P51587 OR5D17P-201ENST00000531492 978 ntBASIC2.36□□□□□ -2.03
BRCA2P51587 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.36□□□□□ -2.03
BRCA2P51587 AC010546.1-201ENST00000569391 485 ntBASIC2.36□□□□□ -2.03
BRCA2P51587 Z99129.2-201ENST00000619967 314 ntBASIC2.36□□□□□ -2.03
BRCA2P51587 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
BRCA2P51587 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
BRCA2P51587 AL445437.1-201ENST00000623157 3087 ntBASIC2.36□□□□□ -2.03
BRCA2P51587 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
BRCA2P51587 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
BRCA2P51587 AC003989.2-201ENST00000440224 169 ntBASIC2.36□□□□□ -2.03
BRCA2P51587 RPL38P4-201ENST00000502376 214 ntBASIC2.36□□□□□ -2.03
BRCA2P51587 AC147055.1-201ENST00000509261 750 ntBASIC2.36□□□□□ -2.03
BRCA2P51587 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.36□□□□□ -2.03
BRCA2P51587 AL359198.2-201ENST00000611836 194 ntBASIC2.36□□□□□ -2.03
BRCA2P51587 Z98941.1-201ENST00000407764 100 ntBASIC2.35□□□□□ -2.03
BRCA2P51587 RN7SL297P-201ENST00000483161 293 ntBASIC2.35□□□□□ -2.03
BRCA2P51587 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.35□□□□□ -2.03
BRCA2P51587 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.35□□□□□ -2.03
BRCA2P51587 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
BRCA2P51587 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
BRCA2P51587 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
BRCA2P51587 RNY1-201ENST00000364228 113 ntBASIC2.35□□□□□ -2.03
BRCA2P51587 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
BRCA2P51587 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
BRCA2P51587 EI24P1-201ENST00000416584 867 ntBASIC2.35□□□□□ -2.03
BRCA2P51587 AC007182.2-201ENST00000489251 402 ntBASIC2.35□□□□□ -2.03
BRCA2P51587 MIR2114-201ENST00000516645 80 ntBASIC2.35□□□□□ -2.03
BRCA2P51587 AC093591.3-201ENST00000634516 308 ntBASIC2.35□□□□□ -2.03
BRCA2P51587 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
BRCA2P51587 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.35□□□□□ -2.03
BRCA2P51587 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
BRCA2P51587 AL354719.1-201ENST00000406535 843 ntBASIC2.35□□□□□ -2.03
BRCA2P51587 AL358453.1-201ENST00000422522 250 ntBASIC2.35□□□□□ -2.03
BRCA2P51587 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.35□□□□□ -2.03
BRCA2P51587 RPS15AP17-201ENST00000470598 390 ntBASIC2.35□□□□□ -2.03
BRCA2P51587 AL121594.1-201ENST00000475906 575 ntBASIC2.35□□□□□ -2.03
BRCA2P51587 AC068305.1-201ENST00000497406 726 ntBASIC2.35□□□□□ -2.03
BRCA2P51587 AC093536.2-201ENST00000565257 1406 ntBASIC2.34□□□□□ -2.03
BRCA2P51587 AC093909.5-201ENST00000621839 1799 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms