Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC007998.5-201ENST00000622938 237 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.69□□□□□ -1.5
RNF144AP50876 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF144AP50876 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
RNF144AP50876 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RNF144AP50876 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF144AP50876 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF144AP50876 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RNF144AP50876 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF144AP50876 AL122126.1-201ENST00000546905 1318 ntBASIC5.69□□□□□ -1.5
RNF144AP50876 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF144AP50876 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF144AP50876 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
RNF144AP50876 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF144AP50876 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF144AP50876 MFSD8-219ENST00000641228 2559 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF144AP50876 AL359955.1-201ENST00000455242 3275 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF144AP50876 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.68□□□□□ -1.5
RNF144AP50876 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RNF144AP50876 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RNF144AP50876 RNA5SP232-201ENST00000364144 119 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 RNVU1-3-201ENST00000364313 161 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 RN7SKP171-201ENST00000364417 303 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 Y_RNA.352-201ENST00000365439 102 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF144AP50876 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RNF144AP50876 AL603910.2-201ENST00000407268 136 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 RNU6-121P-201ENST00000410525 99 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 MRPS21P2-201ENST00000424704 264 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF144AP50876 FTLP19-201ENST00000433300 394 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 POU5F1P5-201ENST00000445059 658 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF144AP50876 AC013470.1-201ENST00000453438 462 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 YRDCP3-201ENST00000456507 480 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 AC091180.1-201ENST00000462104 372 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 AC053481.1-201ENST00000467217 306 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 RN7SL326P-201ENST00000477493 296 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.68□□□□□ -1.5
RNF144AP50876 AC004453.1-201ENST00000487895 408 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 RPL12P30-201ENST00000488389 499 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 AC110792.1-201ENST00000491826 472 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF144AP50876 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF144AP50876 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF144AP50876 Y_RNA.687-201ENST00000516558 91 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF144AP50876 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
RNF144AP50876 AC009852.2-201ENST00000567898 485 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 MIR132-201ENST00000591554 101 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 MIR1244-1-201ENST00000612829 85 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 AL512652.1-201ENST00000619006 500 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 MIR6811-201ENST00000620409 58 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 AC110801.1-201ENST00000623590 212 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF144AP50876 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF144AP50876 MIR1244-3-201ENST00000635744 85 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 MIR1244-2-201ENST00000636449 85 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 MIR1244-4-202ENST00000636813 85 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RNF144AP50876 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF144AP50876 MSL3P1-202ENST00000440028 1468 ntBASIC5.68□□□□□ -1.5
RNF144AP50876 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF144AP50876 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
RNF144AP50876 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF144AP50876 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF144AP50876 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RNF144AP50876 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF144AP50876 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF144AP50876 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.68□□□□□ -1.5
RNF144AP50876 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF144AP50876 IRF5P1-201ENST00000504852 2164 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 LINC01613-201ENST00000561476 2780 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF144AP50876 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF144AP50876 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF144AP50876 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RNF144AP50876 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RNF144AP50876 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF144AP50876 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
RNF144AP50876 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 RNU6-45P-201ENST00000384471 107 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 MIR628-201ENST00000385229 95 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 RNU11-4P-201ENST00000391149 133 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 RPL24P2-201ENST00000421023 475 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 RPS12P5-201ENST00000423449 371 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 MTCO3P29-201ENST00000432119 779 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 GAPDHP59-201ENST00000435908 267 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.67□□□□□ -1.5
RNF144AP50876 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF144AP50876 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF144AP50876 SNORA31.6-201ENST00000516241 130 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 AC109329.1-201ENST00000518744 317 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF144AP50876 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF144AP50876 AC018442.3-201ENST00000523025 183 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms