Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AC139712.2-201ENST00000424302 339 ntBASIC7.28□□□□□ -1.24
PRIM1P49642 RPS23P2-201ENST00000463671 415 ntBASIC7.28□□□□□ -1.24
PRIM1P49642 AC026979.1-201ENST00000492525 396 ntBASIC7.28□□□□□ -1.24
PRIM1P49642 AP002812.1-201ENST00000495378 474 ntBASIC7.28□□□□□ -1.24
PRIM1P49642 AC020893.1-201ENST00000502452 580 ntBASIC7.28□□□□□ -1.24
PRIM1P49642 AC093852.1-201ENST00000503587 266 ntBASIC7.28□□□□□ -1.24
PRIM1P49642 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC7.28□□□□□ -1.24
PRIM1P49642 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC7.28□□□□□ -1.24
PRIM1P49642 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC7.28□□□□□ -1.24
PRIM1P49642 AC104057.1-201ENST00000515547 497 ntBASIC7.28□□□□□ -1.24
PRIM1P49642 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRIM1P49642 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC7.28□□□□□ -1.24
PRIM1P49642 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.28□□□□□ -1.24
PRIM1P49642 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC7.28□□□□□ -1.24
PRIM1P49642 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRIM1P49642 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRIM1P49642 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.28□□□□□ -1.24
PRIM1P49642 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PRIM1P49642 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PRIM1P49642 DLD-204ENST00000437604 1859 ntTSL 2 BASIC7.28□□□□□ -1.24
PRIM1P49642 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PRIM1P49642 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PRIM1P49642 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.24
PRIM1P49642 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.24
PRIM1P49642 MFSD8-239ENST00000641590 2479 ntBASIC7.27□□□□□ -1.24
PRIM1P49642 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PRIM1P49642 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.27□□□□□ -1.25
PRIM1P49642 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PRIM1P49642 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PRIM1P49642 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
PRIM1P49642 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PRIM1P49642 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.27□□□□□ -1.25
PRIM1P49642 MIR133B-201ENST00000362210 119 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 Y_RNA.106-201ENST00000363189 100 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PRIM1P49642 Y_RNA.526-201ENST00000384572 110 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 RNU6-1127P-201ENST00000384580 107 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
PRIM1P49642 DUTP5-201ENST00000406790 469 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 BX682237.1-201ENST00000415016 335 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 RPLP0P7-201ENST00000416050 667 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 AC015977.1-201ENST00000418887 292 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 AC016027.5-201ENST00000427227 210 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC7.27□□□□□ -1.25
PRIM1P49642 HIGD1AP11-201ENST00000438361 280 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 AC104332.1-201ENST00000440471 797 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 AL590664.1-201ENST00000448065 339 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 AC133473.1-201ENST00000455173 299 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 PLGLA-201ENST00000465668 449 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 AC087879.1-201ENST00000474343 374 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 RN7SL447P-201ENST00000494711 245 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 AC114801.2-201ENST00000503825 781 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PRIM1P49642 SNORA14.1-201ENST00000516113 141 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 RNU6-1069P-201ENST00000516612 133 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 Y_RNA.715-201ENST00000517082 110 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 AC090115.3-201ENST00000553218 849 ntBASIC7.27□□□□□ -1.25
PRIM1P49642 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC7.27□□□□□ -1.25
PRIM1P49642 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC7.27□□□□□ -1.25
PRIM1P49642 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.27□□□□□ -1.25
PRIM1P49642 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PRIM1P49642 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PRIM1P49642 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.27□□□□□ -1.25
PRIM1P49642 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
PRIM1P49642 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PRIM1P49642 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PRIM1P49642 AL731532.1-201ENST00000623972 4236 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
PRIM1P49642 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PRIM1P49642 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PRIM1P49642 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PRIM1P49642 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.26□□□□□ -1.25
PRIM1P49642 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.26□□□□□ -1.25
PRIM1P49642 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PRIM1P49642 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PRIM1P49642 SNORD62.1-201ENST00000362541 86 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 Y_RNA.60-201ENST00000362831 98 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 Y_RNA.180-201ENST00000363867 113 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PRIM1P49642 RNU6-55P-201ENST00000411092 107 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 GJA6P-201ENST00000415117 1042 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 RPL23AP38-201ENST00000423801 469 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 PIGPP3-201ENST00000425307 415 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 AC096775.1-201ENST00000437724 448 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 AC006466.1-201ENST00000438721 289 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC7.26□□□□□ -1.25
PRIM1P49642 RPL23AP55-201ENST00000498163 452 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.26□□□□□ -1.25
PRIM1P49642 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC7.26□□□□□ -1.25
PRIM1P49642 Y_RNA.680-201ENST00000516441 93 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 SNORA40.14-201ENST00000516543 86 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC7.26□□□□□ -1.25
PRIM1P49642 AP001922.4-201ENST00000526967 290 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.26□□□□□ -1.25
PRIM1P49642 SUB1P3-201ENST00000564581 315 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
PRIM1P49642 MIR4480-201ENST00000582492 71 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 MIR5692C1-201ENST00000585309 91 ntBASIC7.26□□□□□ -1.25
PRIM1P49642 HMGB2P1-201ENST00000591146 634 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms