Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.03□□□□□ -1.92
RFX3P48380 RNU6-468P-201ENST00000384003 109 ntBASIC3.03□□□□□ -1.92
RFX3P48380 RNU6-821P-201ENST00000390995 107 ntBASIC3.03□□□□□ -1.92
RFX3P48380 TMSB4XP8-201ENST00000402089 135 ntBASIC3.03□□□□□ -1.92
RFX3P48380 TMSB4XP6-201ENST00000415187 135 ntBASIC3.03□□□□□ -1.92
RFX3P48380 MTCO3P12-201ENST00000416718 547 ntBASIC3.03□□□□□ -1.92
RFX3P48380 MRPL50P2-201ENST00000416821 482 ntBASIC3.03□□□□□ -1.92
RFX3P48380 AC012065.2-201ENST00000421295 375 ntBASIC3.03□□□□□ -1.92
RFX3P48380 TMSB4XP1-201ENST00000424567 135 ntBASIC3.03□□□□□ -1.92
RFX3P48380 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.03□□□□□ -1.92
RFX3P48380 AC079780.1-201ENST00000428259 207 ntBASIC3.03□□□□□ -1.92
RFX3P48380 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.03□□□□□ -1.92
RFX3P48380 AL159987.2-201ENST00000432754 307 ntBASIC3.03□□□□□ -1.92
RFX3P48380 AC005019.1-201ENST00000436455 431 ntBASIC3.03□□□□□ -1.92
RFX3P48380 RPL17P49-201ENST00000443728 411 ntBASIC3.03□□□□□ -1.92
RFX3P48380 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.03□□□□□ -1.92
RFX3P48380 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.03□□□□□ -1.92
RFX3P48380 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.03□□□□□ -1.92
RFX3P48380 AL096829.2-201ENST00000446582 742 ntBASIC3.03□□□□□ -1.92
RFX3P48380 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.03□□□□□ -1.92
RFX3P48380 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.03□□□□□ -1.92
RFX3P48380 RPS17P11-201ENST00000474297 293 ntBASIC3.03□□□□□ -1.92
RFX3P48380 CAB39P1-201ENST00000502277 460 ntBASIC3.03□□□□□ -1.92
RFX3P48380 AC096751.1-202ENST00000502691 1067 ntBASIC3.03□□□□□ -1.92
RFX3P48380 WBP1LP4-201ENST00000505043 344 ntBASIC3.03□□□□□ -1.92
RFX3P48380 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.03□□□□□ -1.92
RFX3P48380 AC245166.1-201ENST00000521012 253 ntBASIC3.03□□□□□ -1.92
RFX3P48380 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.03□□□□□ -1.92
RFX3P48380 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
RFX3P48380 LSM6P2-201ENST00000552208 177 ntBASIC3.03□□□□□ -1.92
RFX3P48380 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.03□□□□□ -1.92
RFX3P48380 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.03□□□□□ -1.92
RFX3P48380 AP001029.3-201ENST00000588063 596 ntBASIC3.03□□□□□ -1.92
RFX3P48380 MTATP6P2-201ENST00000603319 678 ntBASIC3.03□□□□□ -1.92
RFX3P48380 AC120053.1-201ENST00000607706 736 ntBASIC3.03□□□□□ -1.92
RFX3P48380 AL157817.1-201ENST00000614264 790 ntBASIC3.03□□□□□ -1.92
RFX3P48380 AC068880.4-201ENST00000623082 495 ntBASIC3.03□□□□□ -1.92
RFX3P48380 AC040168.1-201ENST00000623594 991 ntBASIC3.03□□□□□ -1.92
RFX3P48380 AC091903.1-201ENST00000624322 454 ntBASIC3.03□□□□□ -1.92
RFX3P48380 AL121594.5-201ENST00000631724 573 ntBASIC3.03□□□□□ -1.92
RFX3P48380 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RFX3P48380 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.03□□□□□ -1.92
RFX3P48380 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RFX3P48380 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RFX3P48380 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
RFX3P48380 AC093010.3-201ENST00000570269 15214 ntBASIC3.03□□□□□ -1.92
RFX3P48380 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RFX3P48380 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
RFX3P48380 AC002546.1-201ENST00000588041 2504 ntBASIC3.02□□□□□ -1.93
RFX3P48380 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RFX3P48380 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.02□□□□□ -1.93
RFX3P48380 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.02□□□□□ -1.93
RFX3P48380 RPL7P26-201ENST00000333817 754 ntBASIC3.02□□□□□ -1.93
RFX3P48380 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RFX3P48380 RNU6-353P-201ENST00000364266 108 ntBASIC3.02□□□□□ -1.93
RFX3P48380 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RFX3P48380 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
RFX3P48380 MIR183-201ENST00000384958 110 ntBASIC3.02□□□□□ -1.93
RFX3P48380 GSTA8P-201ENST00000404253 637 ntBASIC3.02□□□□□ -1.93
RFX3P48380 RNU6-712P-201ENST00000410558 100 ntBASIC3.02□□□□□ -1.93
RFX3P48380 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.02□□□□□ -1.93
RFX3P48380 HMGN1P24-201ENST00000412282 298 ntBASIC3.02□□□□□ -1.93
RFX3P48380 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.02□□□□□ -1.93
RFX3P48380 AC019070.1-201ENST00000415008 1024 ntBASIC3.02□□□□□ -1.93
RFX3P48380 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.02□□□□□ -1.93
RFX3P48380 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.02□□□□□ -1.93
RFX3P48380 MTCO2P1-201ENST00000424648 477 ntBASIC3.02□□□□□ -1.93
RFX3P48380 TRIAP1P1-201ENST00000427062 225 ntBASIC3.02□□□□□ -1.93
RFX3P48380 AC097713.2-201ENST00000430199 356 ntBASIC3.02□□□□□ -1.93
RFX3P48380 TRIM60P18-201ENST00000441518 828 ntBASIC3.02□□□□□ -1.93
RFX3P48380 AL592437.1-201ENST00000443781 492 ntBASIC3.02□□□□□ -1.93
RFX3P48380 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RFX3P48380 PRDX3P3-201ENST00000447765 522 ntBASIC3.02□□□□□ -1.93
RFX3P48380 AC115115.1-201ENST00000449927 248 ntBASIC3.02□□□□□ -1.93
RFX3P48380 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.02□□□□□ -1.93
RFX3P48380 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RFX3P48380 AC017015.1-201ENST00000477387 286 ntBASIC3.02□□□□□ -1.93
RFX3P48380 AC092185.1-201ENST00000491371 97 ntBASIC3.02□□□□□ -1.93
RFX3P48380 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
RFX3P48380 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RFX3P48380 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.02□□□□□ -1.93
RFX3P48380 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.02□□□□□ -1.93
RFX3P48380 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.02□□□□□ -1.93
RFX3P48380 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RFX3P48380 HIGD1AP1-201ENST00000550979 275 ntBASIC3.02□□□□□ -1.93
RFX3P48380 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.02□□□□□ -1.93
RFX3P48380 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.02□□□□□ -1.93
RFX3P48380 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.02□□□□□ -1.93
RFX3P48380 MIR4789-201ENST00000577469 82 ntBASIC3.02□□□□□ -1.93
RFX3P48380 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.02□□□□□ -1.93
RFX3P48380 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.02□□□□□ -1.93
RFX3P48380 SRGNP1-201ENST00000603392 451 ntBASIC3.02□□□□□ -1.93
RFX3P48380 RPL21P136-201ENST00000605378 396 ntBASIC3.02□□□□□ -1.93
RFX3P48380 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
RFX3P48380 AC008759.3-201ENST00000613300 508 ntBASIC3.02□□□□□ -1.93
RFX3P48380 AC078880.5-201ENST00000617845 421 ntBASIC3.02□□□□□ -1.93
RFX3P48380 AL590240.3-201ENST00000621416 943 ntBASIC3.02□□□□□ -1.93
RFX3P48380 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.02□□□□□ -1.93
RFX3P48380 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.02□□□□□ -1.93
RFX3P48380 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms