Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.95□□□□□ -1.94
RFC3P40938 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.95□□□□□ -1.94
RFC3P40938 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.95□□□□□ -1.94
RFC3P40938 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.95□□□□□ -1.94
RFC3P40938 AL163153.1-201ENST00000554223 283 ntBASIC2.95□□□□□ -1.94
RFC3P40938 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.95□□□□□ -1.94
RFC3P40938 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.95□□□□□ -1.94
RFC3P40938 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.95□□□□□ -1.94
RFC3P40938 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.95□□□□□ -1.94
RFC3P40938 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.95□□□□□ -1.94
RFC3P40938 MIR5004-201ENST00000579078 107 ntBASIC2.95□□□□□ -1.94
RFC3P40938 BPTFP1-201ENST00000579209 492 ntBASIC2.95□□□□□ -1.94
RFC3P40938 AL020997.3-201ENST00000602843 359 ntBASIC2.95□□□□□ -1.94
RFC3P40938 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.95□□□□□ -1.94
RFC3P40938 AC004832.5-201ENST00000608677 401 ntBASIC2.95□□□□□ -1.94
RFC3P40938 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RFC3P40938 uc_338.1-201ENST00000612113 180 ntBASIC2.95□□□□□ -1.94
RFC3P40938 AL354696.1-201ENST00000614652 497 ntBASIC2.95□□□□□ -1.94
RFC3P40938 AC090116.1-201ENST00000615679 446 ntBASIC2.95□□□□□ -1.94
RFC3P40938 ATP5A1P2-202ENST00000616464 443 ntBASIC2.95□□□□□ -1.94
RFC3P40938 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
RFC3P40938 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.95□□□□□ -1.94
RFC3P40938 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.95□□□□□ -1.94
RFC3P40938 AC097372.4-201ENST00000625025 466 ntBASIC2.95□□□□□ -1.94
RFC3P40938 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.95□□□□□ -1.94
RFC3P40938 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
RFC3P40938 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
RFC3P40938 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RFC3P40938 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
RFC3P40938 RNA5SP258-201ENST00000362750 119 ntBASIC2.94□□□□□ -1.94
RFC3P40938 SNORD65C-201ENST00000390962 71 ntBASIC2.94□□□□□ -1.94
RFC3P40938 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.94□□□□□ -1.94
RFC3P40938 AL121882.1-201ENST00000422893 417 ntBASIC2.94□□□□□ -1.94
RFC3P40938 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.94□□□□□ -1.94
RFC3P40938 RPL23AP82-202ENST00000427528 469 ntBASIC2.94□□□□□ -1.94
RFC3P40938 AL512661.1-201ENST00000434586 1253 ntBASIC2.94□□□□□ -1.94
RFC3P40938 AC244505.4-201ENST00000434905 287 ntBASIC2.94□□□□□ -1.94
RFC3P40938 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.94□□□□□ -1.94
RFC3P40938 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.94□□□□□ -1.94
RFC3P40938 ATP5C1P1-201ENST00000441945 895 ntBASIC2.94□□□□□ -1.94
RFC3P40938 SSXP5-201ENST00000443473 287 ntBASIC2.94□□□□□ -1.94
RFC3P40938 HSFY3P-201ENST00000444242 1191 ntBASIC2.94□□□□□ -1.94
RFC3P40938 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.94□□□□□ -1.94
RFC3P40938 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.94□□□□□ -1.94
RFC3P40938 RPL7P55-201ENST00000450522 746 ntBASIC2.94□□□□□ -1.94
RFC3P40938 SSXP4-201ENST00000451349 245 ntBASIC2.94□□□□□ -1.94
RFC3P40938 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.94□□□□□ -1.94
RFC3P40938 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.94□□□□□ -1.94
RFC3P40938 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.94□□□□□ -1.94
RFC3P40938 CENPBD1P1-201ENST00000464061 469 ntBASIC2.94□□□□□ -1.94
RFC3P40938 RPS3AP43-201ENST00000479743 781 ntBASIC2.94□□□□□ -1.94
RFC3P40938 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RFC3P40938 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.94□□□□□ -1.94
RFC3P40938 RNA5SP468-201ENST00000516782 93 ntBASIC2.94□□□□□ -1.94
RFC3P40938 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.94□□□□□ -1.94
RFC3P40938 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.94□□□□□ -1.94
RFC3P40938 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.94□□□□□ -1.94
RFC3P40938 AL451074.6-201ENST00000608512 729 ntBASIC2.94□□□□□ -1.94
RFC3P40938 AC098679.5-201ENST00000624394 571 ntBASIC2.94□□□□□ -1.94
RFC3P40938 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.94□□□□□ -1.94
RFC3P40938 HPVC1-201ENST00000629899 1198 ntBASIC2.94□□□□□ -1.94
RFC3P40938 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.94□□□□□ -1.94
RFC3P40938 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFC3P40938 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.93□□□□□ -1.94
RFC3P40938 MIR16-2-201ENST00000362117 81 ntBASIC2.93□□□□□ -1.94
RFC3P40938 RNU6-50P-201ENST00000362356 103 ntBASIC2.93□□□□□ -1.94
RFC3P40938 RNU6-730P-201ENST00000383954 104 ntBASIC2.93□□□□□ -1.94
RFC3P40938 RNU6-481P-201ENST00000384194 107 ntBASIC2.93□□□□□ -1.94
RFC3P40938 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.93□□□□□ -1.94
RFC3P40938 FNDC3CP-201ENST00000420795 1155 ntBASIC2.93□□□□□ -1.94
RFC3P40938 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.93□□□□□ -1.94
RFC3P40938 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.93□□□□□ -1.94
RFC3P40938 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.93□□□□□ -1.94
RFC3P40938 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.93□□□□□ -1.94
RFC3P40938 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.93□□□□□ -1.94
RFC3P40938 RPS26P21-201ENST00000475397 348 ntBASIC2.93□□□□□ -1.94
RFC3P40938 AC109925.1-201ENST00000478069 331 ntBASIC2.93□□□□□ -1.94
RFC3P40938 AC006483.1-201ENST00000487308 313 ntBASIC2.93□□□□□ -1.94
RFC3P40938 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.93□□□□□ -1.94
RFC3P40938 GMPSP1-201ENST00000514075 579 ntBASIC2.93□□□□□ -1.94
RFC3P40938 RNU1-61P-201ENST00000516107 151 ntBASIC2.93□□□□□ -1.94
RFC3P40938 MIR2276-201ENST00000516886 89 ntBASIC2.93□□□□□ -1.94
RFC3P40938 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.93□□□□□ -1.94
RFC3P40938 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.93□□□□□ -1.94
RFC3P40938 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.93□□□□□ -1.94
RFC3P40938 MIR4474-201ENST00000579189 78 ntBASIC2.93□□□□□ -1.94
RFC3P40938 MIR4325-201ENST00000583049 90 ntBASIC2.93□□□□□ -1.94
RFC3P40938 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.93□□□□□ -1.94
RFC3P40938 AL451007.1-201ENST00000595491 289 ntBASIC2.93□□□□□ -1.94
RFC3P40938 AC133794.1-201ENST00000602731 914 ntBASIC2.93□□□□□ -1.94
RFC3P40938 AL390240.1-201ENST00000612950 384 ntBASIC2.93□□□□□ -1.94
RFC3P40938 AC100793.4-201ENST00000613683 429 ntBASIC2.93□□□□□ -1.94
RFC3P40938 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.93□□□□□ -1.94
RFC3P40938 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.93□□□□□ -1.94
RFC3P40938 AC002546.1-201ENST00000588041 2504 ntBASIC2.93□□□□□ -1.94
RFC3P40938 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFC3P40938 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFC3P40938 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RFC3P40938 SGO1P1-201ENST00000603525 1447 ntBASIC2.93□□□□□ -1.94
RFC3P40938 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms