Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AL592148.1-201ENST00000413568 445 ntBASIC2.04□□□□□ -2.08
SNCAP37840 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.04□□□□□ -2.08
SNCAP37840 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.04□□□□□ -2.08
SNCAP37840 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.04□□□□□ -2.08
SNCAP37840 AC110792.2-201ENST00000510278 224 ntBASIC2.04□□□□□ -2.08
SNCAP37840 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.04□□□□□ -2.08
SNCAP37840 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.04□□□□□ -2.08
SNCAP37840 RNU1-104P-201ENST00000517280 175 ntBASIC2.04□□□□□ -2.08
SNCAP37840 AP003102.1-201ENST00000525638 661 ntBASIC2.04□□□□□ -2.08
SNCAP37840 AP000790.1-201ENST00000528891 737 ntBASIC2.04□□□□□ -2.08
SNCAP37840 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.04□□□□□ -2.08
SNCAP37840 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.04□□□□□ -2.08
SNCAP37840 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.04□□□□□ -2.08
SNCAP37840 CYCSP39-201ENST00000565821 309 ntBASIC2.04□□□□□ -2.08
SNCAP37840 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SNCAP37840 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.04□□□□□ -2.08
SNCAP37840 AC096577.2-201ENST00000611455 153 ntBASIC2.04□□□□□ -2.08
SNCAP37840 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.04□□□□□ -2.08
SNCAP37840 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.04□□□□□ -2.08
SNCAP37840 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.04□□□□□ -2.08
SNCAP37840 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SNCAP37840 AC073346.2-201ENST00000624724 2058 ntBASIC2.03□□□□□ -2.08
SNCAP37840 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SNCAP37840 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SNCAP37840 SNORA9-201ENST00000384215 133 ntBASIC2.03□□□□□ -2.08
SNCAP37840 MIR320B1-201ENST00000390209 79 ntBASIC2.03□□□□□ -2.08
SNCAP37840 AL591034.1-201ENST00000407447 340 ntBASIC2.03□□□□□ -2.08
SNCAP37840 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.03□□□□□ -2.08
SNCAP37840 AC080125.1-201ENST00000414888 684 ntBASIC2.03□□□□□ -2.08
SNCAP37840 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.03□□□□□ -2.08
SNCAP37840 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.03□□□□□ -2.08
SNCAP37840 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.03□□□□□ -2.08
SNCAP37840 AL135938.1-201ENST00000443141 297 ntBASIC2.03□□□□□ -2.08
SNCAP37840 AC104389.3-201ENST00000445629 235 ntBASIC2.03□□□□□ -2.08
SNCAP37840 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.03□□□□□ -2.08
SNCAP37840 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.03□□□□□ -2.08
SNCAP37840 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.03□□□□□ -2.08
SNCAP37840 AC008280.2-201ENST00000455473 307 ntBASIC2.03□□□□□ -2.08
SNCAP37840 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.03□□□□□ -2.08
SNCAP37840 HMGB3P3-201ENST00000510526 400 ntBASIC2.03□□□□□ -2.08
SNCAP37840 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.03□□□□□ -2.08
SNCAP37840 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.03□□□□□ -2.08
SNCAP37840 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.03□□□□□ -2.08
SNCAP37840 AC087373.1-201ENST00000524920 491 ntBASIC2.03□□□□□ -2.08
SNCAP37840 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SNCAP37840 AC128657.1-201ENST00000549459 145 ntBASIC2.03□□□□□ -2.08
SNCAP37840 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.03□□□□□ -2.08
SNCAP37840 CKS1BP1-201ENST00000555221 240 ntBASIC2.03□□□□□ -2.08
SNCAP37840 ISCA1P3-201ENST00000577104 373 ntBASIC2.03□□□□□ -2.08
SNCAP37840 AC053481.3-201ENST00000577881 843 ntBASIC2.03□□□□□ -2.08
SNCAP37840 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
SNCAP37840 AC007179.3-201ENST00000604976 235 ntBASIC2.03□□□□□ -2.08
SNCAP37840 AC006329.2-201ENST00000611491 394 ntBASIC2.03□□□□□ -2.08
SNCAP37840 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.03□□□□□ -2.08
SNCAP37840 AP004607.9-201ENST00000618202 316 ntBASIC2.03□□□□□ -2.08
SNCAP37840 AC004777.1-201ENST00000624317 287 ntBASIC2.03□□□□□ -2.08
SNCAP37840 ZNF720P1-201ENST00000562403 1939 ntBASIC2.03□□□□□ -2.08
SNCAP37840 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SNCAP37840 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SNCAP37840 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.02□□□□□ -2.09
SNCAP37840 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SNCAP37840 RNA5SP171-201ENST00000391071 115 ntBASIC2.02□□□□□ -2.09
SNCAP37840 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.02□□□□□ -2.09
SNCAP37840 RNU2-25P-201ENST00000411041 191 ntBASIC2.02□□□□□ -2.09
SNCAP37840 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.02□□□□□ -2.09
SNCAP37840 HMGN2P30-201ENST00000423237 256 ntBASIC2.02□□□□□ -2.09
SNCAP37840 PTP4A1P3-201ENST00000433661 420 ntBASIC2.02□□□□□ -2.09
SNCAP37840 CKS1BP5-201ENST00000434172 273 ntBASIC2.02□□□□□ -2.09
SNCAP37840 AL513328.1-201ENST00000446460 224 ntBASIC2.02□□□□□ -2.09
SNCAP37840 AL031659.1-201ENST00000447075 539 ntBASIC2.02□□□□□ -2.09
SNCAP37840 AL445669.2-201ENST00000454425 421 ntBASIC2.02□□□□□ -2.09
SNCAP37840 S100A11P2-201ENST00000467589 312 ntBASIC2.02□□□□□ -2.09
SNCAP37840 AC021205.1-201ENST00000468797 348 ntBASIC2.02□□□□□ -2.09
SNCAP37840 RNA5SP282-201ENST00000516355 108 ntBASIC2.02□□□□□ -2.09
SNCAP37840 AP003467.2-201ENST00000520175 319 ntBASIC2.02□□□□□ -2.09
SNCAP37840 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.02□□□□□ -2.09
SNCAP37840 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.02□□□□□ -2.09
SNCAP37840 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.02□□□□□ -2.09
SNCAP37840 AC078814.3-201ENST00000553036 491 ntBASIC2.02□□□□□ -2.09
SNCAP37840 NBEAP1-201ENST00000554452 979 ntBASIC2.02□□□□□ -2.09
SNCAP37840 DNAJC8P1-201ENST00000554535 372 ntBASIC2.02□□□□□ -2.09
SNCAP37840 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.02□□□□□ -2.09
SNCAP37840 AL133507.1-201ENST00000605269 557 ntBASIC2.02□□□□□ -2.09
SNCAP37840 MIR92B-201ENST00000607575 96 ntBASIC2.02□□□□□ -2.09
SNCAP37840 MIR6798-201ENST00000612887 67 ntBASIC2.02□□□□□ -2.09
SNCAP37840 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC2.02□□□□□ -2.09
SNCAP37840 CRYM-AS1-204ENST00000637983 556 ntBASIC2.02□□□□□ -2.09
SNCAP37840 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.02□□□□□ -2.09
SNCAP37840 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.02□□□□□ -2.09
SNCAP37840 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SNCAP37840 SAGE4P-201ENST00000442271 3381 ntBASIC2.02□□□□□ -2.09
SNCAP37840 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
SNCAP37840 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SNCAP37840 PABPC1P7-201ENST00000413177 1513 ntBASIC2.01□□□□□ -2.09
SNCAP37840 AP001350.1-201ENST00000601906 1524 ntBASIC2.01□□□□□ -2.09
SNCAP37840 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
SNCAP37840 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.01□□□□□ -2.09
SNCAP37840 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SNCAP37840 MIRLET7G-201ENST00000362280 84 ntBASIC2.01□□□□□ -2.09
SNCAP37840 DEFB109C-201ENST00000382575 264 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms