Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RNA5SP447-201ENST00000363749 119 ntBASIC5.06□□□□□ -1.6
HMGB1P09429 RNA5SP88-201ENST00000365560 109 ntBASIC5.06□□□□□ -1.6
HMGB1P09429 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB1P09429 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB1P09429 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGB1P09429 RPS29P17-201ENST00000430795 166 ntBASIC5.06□□□□□ -1.6
HMGB1P09429 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGB1P09429 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGB1P09429 AL354941.1-201ENST00000438600 464 ntBASIC5.06□□□□□ -1.6
HMGB1P09429 AL591503.2-201ENST00000442314 1005 ntBASIC5.06□□□□□ -1.6
HMGB1P09429 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGB1P09429 AL031183.1-201ENST00000457667 207 ntBASIC5.06□□□□□ -1.6
HMGB1P09429 RPL23AP24-201ENST00000458203 385 ntBASIC5.06□□□□□ -1.6
HMGB1P09429 RPL7L1P8-201ENST00000469911 741 ntBASIC5.06□□□□□ -1.6
HMGB1P09429 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGB1P09429 AC106872.3-201ENST00000495104 446 ntBASIC5.06□□□□□ -1.6
HMGB1P09429 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGB1P09429 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGB1P09429 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGB1P09429 CDH12P4-201ENST00000517835 295 ntBASIC5.06□□□□□ -1.6
HMGB1P09429 CDH12P3-201ENST00000517935 295 ntBASIC5.06□□□□□ -1.6
HMGB1P09429 CDH12P1-201ENST00000518435 295 ntBASIC5.06□□□□□ -1.6
HMGB1P09429 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.06□□□□□ -1.6
HMGB1P09429 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGB1P09429 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB1P09429 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.06□□□□□ -1.6
HMGB1P09429 HSPE1P7-201ENST00000604681 321 ntBASIC5.06□□□□□ -1.6
HMGB1P09429 AL031666.3-201ENST00000609320 1006 ntBASIC5.06□□□□□ -1.6
HMGB1P09429 AC019226.1-201ENST00000625666 515 ntBASIC5.06□□□□□ -1.6
HMGB1P09429 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HMGB1P09429 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB1P09429 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB1P09429 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB1P09429 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGB1P09429 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGB1P09429 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB1P09429 DDX10P1-201ENST00000448545 1933 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HMGB1P09429 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB1P09429 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGB1P09429 RNU4-28P-201ENST00000364739 141 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB1P09429 RNU6-432P-201ENST00000384196 109 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 MIR514A1-201ENST00000385133 98 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 RN7SKP235-201ENST00000410662 305 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 TPMTP3-201ENST00000411928 735 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 AC245054.1-201ENST00000420944 258 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 HSPE1P1-201ENST00000421494 318 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 AL590383.1-201ENST00000428602 75 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 HLA-N-201ENST00000437516 135 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 AL356535.1-201ENST00000440335 398 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 AL591719.1-201ENST00000444669 744 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGB1P09429 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGB1P09429 OR5M7P-201ENST00000526140 972 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGB1P09429 CCNG2P1-201ENST00000549521 1000 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 SETP2-201ENST00000553886 926 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGB1P09429 AL031985.2-201ENST00000600955 480 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 AL356218.2-201ENST00000605264 187 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 AC013244.3-201ENST00000605614 388 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 AC024560.3-201ENST00000608482 349 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 AC103710.4-201ENST00000609301 899 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 FAM27D1-201ENST00000612308 341 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 AC009464.1-201ENST00000615731 469 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 MIR7702-201ENST00000621931 59 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HMGB1P09429 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB1P09429 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HMGB1P09429 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGB1P09429 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB1P09429 AC073429.2-201ENST00000569694 1444 ntBASIC5.05□□□□□ -1.6
HMGB1P09429 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HMGB1P09429 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
HMGB1P09429 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB1P09429 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HMGB1P09429 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB1P09429 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
HMGB1P09429 SNORA36C-201ENST00000384289 132 ntBASIC5.04□□□□□ -1.6
HMGB1P09429 RN7SKP266-201ENST00000410232 287 ntBASIC5.04□□□□□ -1.6
HMGB1P09429 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGB1P09429 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGB1P09429 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGB1P09429 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGB1P09429 AL109741.2-201ENST00000455561 343 ntBASIC5.04□□□□□ -1.6
HMGB1P09429 RPS29P33-201ENST00000456717 146 ntBASIC5.04□□□□□ -1.6
HMGB1P09429 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGB1P09429 RPL35P6-201ENST00000490024 372 ntBASIC5.04□□□□□ -1.6
HMGB1P09429 OR51K1P-201ENST00000510214 950 ntBASIC5.04□□□□□ -1.6
HMGB1P09429 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGB1P09429 HNRNPKP5-201ENST00000515300 253 ntBASIC5.04□□□□□ -1.6
HMGB1P09429 RNU6-1256P-201ENST00000516539 103 ntBASIC5.04□□□□□ -1.6
HMGB1P09429 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGB1P09429 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB1P09429 UBE2NP1-201ENST00000545592 458 ntBASIC5.04□□□□□ -1.6
HMGB1P09429 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGB1P09429 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGB1P09429 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGB1P09429 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms