Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.7□□□□□ -1.82
VTNP04004 AC023050.2-201ENST00000544968 387 ntBASIC3.7□□□□□ -1.82
VTNP04004 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.7□□□□□ -1.82
VTNP04004 NBEAP1-201ENST00000554452 979 ntBASIC3.7□□□□□ -1.82
VTNP04004 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.7□□□□□ -1.82
VTNP04004 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.7□□□□□ -1.82
VTNP04004 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.7□□□□□ -1.82
VTNP04004 AC141257.3-201ENST00000572906 215 ntBASIC3.7□□□□□ -1.82
VTNP04004 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.7□□□□□ -1.82
VTNP04004 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.7□□□□□ -1.82
VTNP04004 AC012493.2-201ENST00000595083 291 ntBASIC3.7□□□□□ -1.82
VTNP04004 CKS1BP3-201ENST00000600888 237 ntBASIC3.7□□□□□ -1.82
VTNP04004 AL390838.2-201ENST00000602394 274 ntBASIC3.7□□□□□ -1.82
VTNP04004 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.7□□□□□ -1.82
VTNP04004 AL160281.1-201ENST00000605307 311 ntBASIC3.7□□□□□ -1.82
VTNP04004 AL158042.1-201ENST00000605338 460 ntBASIC3.7□□□□□ -1.82
VTNP04004 AC005000.2-201ENST00000605468 310 ntBASIC3.7□□□□□ -1.82
VTNP04004 AL451074.6-201ENST00000608512 729 ntBASIC3.7□□□□□ -1.82
VTNP04004 AC092954.1-201ENST00000609121 445 ntBASIC3.7□□□□□ -1.82
VTNP04004 AC131235.4-201ENST00000609288 620 ntBASIC3.7□□□□□ -1.82
VTNP04004 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.7□□□□□ -1.82
VTNP04004 MIR8057-201ENST00000620957 69 ntBASIC3.7□□□□□ -1.82
VTNP04004 MIR4496-201ENST00000635896 61 ntBASIC3.7□□□□□ -1.82
VTNP04004 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VTNP04004 MTND5P28-201ENST00000438005 1594 ntBASIC3.7□□□□□ -1.82
VTNP04004 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.7□□□□□ -1.82
VTNP04004 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.7□□□□□ -1.82
VTNP04004 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.7□□□□□ -1.82
VTNP04004 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VTNP04004 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.7□□□□□ -1.82
VTNP04004 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.69□□□□□ -1.82
VTNP04004 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.69□□□□□ -1.82
VTNP04004 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VTNP04004 Y_RNA.408-201ENST00000383987 102 ntBASIC3.69□□□□□ -1.82
VTNP04004 BTBD10P2-201ENST00000404779 676 ntBASIC3.69□□□□□ -1.82
VTNP04004 MTCO3P31-201ENST00000405526 789 ntBASIC3.69□□□□□ -1.82
VTNP04004 RNA5SP80-201ENST00000410475 111 ntBASIC3.69□□□□□ -1.82
VTNP04004 Z92545.1-201ENST00000411782 234 ntBASIC3.69□□□□□ -1.82
VTNP04004 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VTNP04004 VPS26BP1-201ENST00000417155 755 ntBASIC3.69□□□□□ -1.82
VTNP04004 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.69□□□□□ -1.82
VTNP04004 MTCO3P1-205ENST00000422088 832 ntBASIC3.69□□□□□ -1.82
VTNP04004 AC233981.1-201ENST00000423224 461 ntBASIC3.69□□□□□ -1.82
VTNP04004 RPL7P44-201ENST00000424827 742 ntBASIC3.69□□□□□ -1.82
VTNP04004 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.69□□□□□ -1.82
VTNP04004 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.69□□□□□ -1.82
VTNP04004 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.69□□□□□ -1.82
VTNP04004 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.69□□□□□ -1.82
VTNP04004 AL034418.1-201ENST00000448675 860 ntBASIC3.69□□□□□ -1.82
VTNP04004 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.69□□□□□ -1.82
VTNP04004 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VTNP04004 RPL5P24-201ENST00000463742 885 ntBASIC3.69□□□□□ -1.82
VTNP04004 AP000893.1-201ENST00000474462 794 ntBASIC3.69□□□□□ -1.82
VTNP04004 S100A11P1-201ENST00000477525 312 ntBASIC3.69□□□□□ -1.82
VTNP04004 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.69□□□□□ -1.82
VTNP04004 SNX5P1-201ENST00000505757 1041 ntBASIC3.69□□□□□ -1.82
VTNP04004 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.69□□□□□ -1.82
VTNP04004 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.69□□□□□ -1.82
VTNP04004 APOOP4-201ENST00000513530 597 ntBASIC3.69□□□□□ -1.82
VTNP04004 RNU6-1225P-201ENST00000516336 65 ntBASIC3.69□□□□□ -1.82
VTNP04004 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.69□□□□□ -1.82
VTNP04004 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.69□□□□□ -1.82
VTNP04004 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.69□□□□□ -1.82
VTNP04004 AC005832.3-201ENST00000537929 631 ntBASIC3.69□□□□□ -1.82
VTNP04004 HIGD1AP17-201ENST00000554576 276 ntBASIC3.69□□□□□ -1.82
VTNP04004 AC138915.2-201ENST00000569776 97 ntBASIC3.69□□□□□ -1.82
VTNP04004 AL354943.1-201ENST00000572103 781 ntBASIC3.69□□□□□ -1.82
VTNP04004 MIR4504-201ENST00000577413 92 ntBASIC3.69□□□□□ -1.82
VTNP04004 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.69□□□□□ -1.82
VTNP04004 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.69□□□□□ -1.82
VTNP04004 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.69□□□□□ -1.82
VTNP04004 AC008751.2-201ENST00000597885 980 ntBASIC3.69□□□□□ -1.82
VTNP04004 AP000484.1-201ENST00000620067 1252 ntBASIC3.69□□□□□ -1.82
VTNP04004 AL512506.2-201ENST00000624472 458 ntBASIC3.69□□□□□ -1.82
VTNP04004 AC017037.3-201ENST00000625016 472 ntBASIC3.69□□□□□ -1.82
VTNP04004 AC116618.1-201ENST00000634617 774 ntBASIC3.69□□□□□ -1.82
VTNP04004 AC068620.4-201ENST00000636730 1182 ntBASIC3.69□□□□□ -1.82
VTNP04004 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.69□□□□□ -1.82
VTNP04004 AL513302.2-201ENST00000562313 1842 ntBASIC3.69□□□□□ -1.82
VTNP04004 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
VTNP04004 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VTNP04004 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.69□□□□□ -1.82
VTNP04004 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.69□□□□□ -1.82
VTNP04004 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
VTNP04004 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.68□□□□□ -1.82
VTNP04004 CEP170P1-201ENST00000502249 4587 ntBASIC3.68□□□□□ -1.82
VTNP04004 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VTNP04004 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VTNP04004 ZNF833P-201ENST00000424938 1494 ntBASIC3.68□□□□□ -1.82
VTNP04004 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VTNP04004 MTND5P31-201ENST00000419366 1374 ntBASIC3.68□□□□□ -1.82
VTNP04004 RNU5D-1-201ENST00000363299 116 ntBASIC3.68□□□□□ -1.82
VTNP04004 MIR128-1-201ENST00000384921 82 ntBASIC3.68□□□□□ -1.82
VTNP04004 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.68□□□□□ -1.82
VTNP04004 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.68□□□□□ -1.82
VTNP04004 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.68□□□□□ -1.82
VTNP04004 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.68□□□□□ -1.82
VTNP04004 AL512649.1-201ENST00000428997 581 ntBASIC3.68□□□□□ -1.82
VTNP04004 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.68□□□□□ -1.82
VTNP04004 MTND3P1-201ENST00000441336 220 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms