Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.6□□□□□ -1.83
PDGFBP01127 USP9YP21-201ENST00000420603 432 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.6□□□□□ -1.83
PDGFBP01127 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.6□□□□□ -1.83
PDGFBP01127 MTCYBP32-201ENST00000427945 1084 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 GTF2IP3-201ENST00000433887 494 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.6□□□□□ -1.83
PDGFBP01127 SETP5-201ENST00000437270 562 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 PTGES3P1-201ENST00000439531 483 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 NANOGNBP1-201ENST00000448444 480 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 DUXAP8-207ENST00000456786 622 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 RPS20P24-201ENST00000457473 361 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 RN7SL585P-201ENST00000470538 280 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 RNA5SP468-201ENST00000516782 93 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.6□□□□□ -1.83
PDGFBP01127 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.6□□□□□ -1.83
PDGFBP01127 OR10V3P-201ENST00000525712 725 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 MTCO3P15-201ENST00000526563 574 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.6□□□□□ -1.83
PDGFBP01127 AC023161.2-201ENST00000551218 780 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 AC034105.3-201ENST00000565294 442 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.6□□□□□ -1.83
PDGFBP01127 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.6□□□□□ -1.83
PDGFBP01127 RPL12P50-201ENST00000603116 116 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 AC110741.2-201ENST00000605278 268 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.6□□□□□ -1.83
PDGFBP01127 AC009237.15-201ENST00000610252 501 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 AC013412.1-201ENST00000610687 192 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 DUXAP10-204ENST00000612052 616 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 MIR7106-201ENST00000612419 65 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 AC110801.1-201ENST00000623590 212 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 AL359757.2-201ENST00000624309 274 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PDGFBP01127 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDGFBP01127 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 MTND4P34-201ENST00000572715 1371 ntBASIC3.6□□□□□ -1.83
PDGFBP01127 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PDGFBP01127 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDGFBP01127 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.59□□□□□ -1.83
PDGFBP01127 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDGFBP01127 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDGFBP01127 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDGFBP01127 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDGFBP01127 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDGFBP01127 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDGFBP01127 RNU6-989P-201ENST00000362756 107 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 RNU5E-10P-201ENST00000363506 118 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 SNORA72.3-201ENST00000365074 132 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PDGFBP01127 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PDGFBP01127 SNORA48.8-201ENST00000391324 134 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.59□□□□□ -1.83
PDGFBP01127 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 AL133264.1-201ENST00000407157 562 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
PDGFBP01127 SDCBPP2-201ENST00000424643 885 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 RAC1P8-201ENST00000427086 527 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.59□□□□□ -1.83
PDGFBP01127 AL158071.1-201ENST00000430315 461 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.59□□□□□ -1.83
PDGFBP01127 AC006028.1-201ENST00000438379 402 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFBP01127 MTCO1P48-201ENST00000448024 1096 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 AC010655.1-201ENST00000449336 292 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.59□□□□□ -1.83
PDGFBP01127 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFBP01127 RPL7P47-201ENST00000497299 556 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFBP01127 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFBP01127 AC113420.1-201ENST00000507903 571 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 MTCYBP37-201ENST00000510642 1133 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 SCARNA1-201ENST00000517138 166 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFBP01127 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFBP01127 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.59□□□□□ -1.83
PDGFBP01127 AC092851.1-201ENST00000535964 478 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 AC092747.2-201ENST00000545069 983 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 SYF2P1-201ENST00000550658 413 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFBP01127 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFBP01127 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFBP01127 AC090877.1-201ENST00000561418 344 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.59□□□□□ -1.83
PDGFBP01127 AL157394.1-201ENST00000562983 1224 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 AC245884.10-201ENST00000597355 337 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 AC006329.2-201ENST00000611491 394 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 AC138932.5-201ENST00000617759 563 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 AL137790.1-201ENST00000634283 177 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDGFBP01127 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDGFBP01127 GDI2P1-201ENST00000429312 1336 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 MTND4P10-201ENST00000446199 1363 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 AC244517.1-201ENST00000606030 2086 ntBASIC3.59□□□□□ -1.83
PDGFBP01127 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
PDGFBP01127 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PDGFBP01127 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.59□□□□□ -1.84
PDGFBP01127 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.59□□□□□ -1.84
PDGFBP01127 AL353746.1-201ENST00000566293 6881 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.58□□□□□ -1.84
PDGFBP01127 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms