Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 MTCO1P14-201ENST00000441695 1559 ntBASIC5.7□□□□□ -1.5
RAPGEF3O95398 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
RAPGEF3O95398 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 MTND4P26-201ENST00000415971 1359 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 AP000542.2-201ENST00000623199 6179 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 OR4G11P-202ENST00000642116 1414 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 RNU6-501P-201ENST00000364072 100 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 RNY3P10-201ENST00000384764 102 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 UBA52P6-201ENST00000399822 382 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 AL512430.2-201ENST00000406786 339 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 Y_RNA.619-201ENST00000410951 90 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 AC007899.1-201ENST00000412776 775 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 CDK8P2-201ENST00000415020 547 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 AC127537.2-201ENST00000439258 465 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 TRGVB-201ENST00000453257 471 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 CFTRP1-201ENST00000456646 183 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 BTF3P5-201ENST00000457252 467 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 OR4G11P-201ENST00000492842 939 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 RFPL4AP5-201ENST00000514977 504 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 LSM3P2-201ENST00000551246 273 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 EIF5A2P1-201ENST00000564027 460 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 AL136363.2-201ENST00000604173 851 ntBASIC5.69□□□□□ -1.5
RAPGEF3O95398 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAPGEF3O95398 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAPGEF3O95398 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RAPGEF3O95398 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAPGEF3O95398 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAPGEF3O95398 AC093535.2-201ENST00000624769 2326 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 BDP1P-201ENST00000582658 1990 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAPGEF3O95398 RNU6-723P-201ENST00000383973 107 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 RNU6-146P-201ENST00000384602 108 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 VDAC1P9-201ENST00000412766 841 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 AC083875.1-201ENST00000419509 405 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 BX842559.1-201ENST00000419615 532 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 RPL12P46-201ENST00000436610 195 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 LARP1BP3-201ENST00000437229 869 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 RPS26P56-201ENST00000444468 240 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 SUMO2P2-201ENST00000456482 255 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 AC097493.1-201ENST00000463958 372 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 RPL30P9-201ENST00000465586 330 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 AP000893.1-201ENST00000474462 794 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 RPS27AP1-201ENST00000475545 471 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 RPL23AP65-201ENST00000475608 468 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 RN7SL271P-201ENST00000487601 295 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 AC020893.1-201ENST00000502452 580 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAPGEF3O95398 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 AL117351.2-201ENST00000513571 157 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 RNA5SP164-201ENST00000516533 110 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAPGEF3O95398 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 OR6C7P-201ENST00000547875 934 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 MIR5186-201ENST00000577504 120 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 AC116312.1-201ENST00000606841 314 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAPGEF3O95398 AC015540.1-201ENST00000615828 501 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 AC090971.4-201ENST00000560291 1800 ntBASIC5.68□□□□□ -1.5
RAPGEF3O95398 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAPGEF3O95398 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAPGEF3O95398 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAPGEF3O95398 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.68□□□□□ -1.5
RAPGEF3O95398 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.67□□□□□ -1.5
RAPGEF3O95398 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms