Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 OR6K3-202ENST00000368146 996 ntBASIC2.95□□□□□ -1.94
SHOX2O60902 MIR128-1-201ENST00000384921 82 ntBASIC2.95□□□□□ -1.94
SHOX2O60902 MTND4LP20-201ENST00000402379 270 ntBASIC2.95□□□□□ -1.94
SHOX2O60902 RPL7P25-201ENST00000404151 721 ntBASIC2.95□□□□□ -1.94
SHOX2O60902 RPS29P4-201ENST00000414733 161 ntBASIC2.95□□□□□ -1.94
SHOX2O60902 AC244453.4-201ENST00000419150 388 ntBASIC2.95□□□□□ -1.94
SHOX2O60902 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.95□□□□□ -1.94
SHOX2O60902 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.95□□□□□ -1.94
SHOX2O60902 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.95□□□□□ -1.94
SHOX2O60902 HIGD1AP11-201ENST00000438361 280 ntBASIC2.95□□□□□ -1.94
SHOX2O60902 SSXP4-201ENST00000451349 245 ntBASIC2.95□□□□□ -1.94
SHOX2O60902 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.95□□□□□ -1.94
SHOX2O60902 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.95□□□□□ -1.94
SHOX2O60902 SNORA9.3-201ENST00000516383 129 ntBASIC2.95□□□□□ -1.94
SHOX2O60902 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.95□□□□□ -1.94
SHOX2O60902 AP004371.1-201ENST00000525240 214 ntBASIC2.95□□□□□ -1.94
SHOX2O60902 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.95□□□□□ -1.94
SHOX2O60902 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.95□□□□□ -1.94
SHOX2O60902 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.95□□□□□ -1.94
SHOX2O60902 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.95□□□□□ -1.94
SHOX2O60902 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.95□□□□□ -1.94
SHOX2O60902 PRELID3BP8-201ENST00000604148 295 ntBASIC2.95□□□□□ -1.94
SHOX2O60902 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.95□□□□□ -1.94
SHOX2O60902 AL049781.1-201ENST00000623195 3585 ntBASIC2.95□□□□□ -1.94
SHOX2O60902 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SHOX2O60902 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.95□□□□□ -1.94
SHOX2O60902 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHOX2O60902 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHOX2O60902 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.94□□□□□ -1.94
SHOX2O60902 FTLP6-201ENST00000355274 422 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHOX2O60902 SNORD21-201ENST00000383953 95 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 RNU6-40P-201ENST00000384254 107 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHOX2O60902 TAF9BP2-201ENST00000400856 499 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 HMGN2P35-201ENST00000412164 270 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 AL513175.2-201ENST00000422071 443 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.94□□□□□ -1.94
SHOX2O60902 AC109583.1-201ENST00000432156 268 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 AL159987.2-201ENST00000432754 307 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.94□□□□□ -1.94
SHOX2O60902 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.94□□□□□ -1.94
SHOX2O60902 AC068135.1-201ENST00000446164 246 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 RPL23AP15-201ENST00000450202 459 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 AC104308.1-201ENST00000454621 333 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 RN7SL601P-201ENST00000471221 293 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.94□□□□□ -1.94
SHOX2O60902 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.94□□□□□ -1.94
SHOX2O60902 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.94□□□□□ -1.94
SHOX2O60902 RNU6-551P-201ENST00000516661 103 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 RNU6-1073P-201ENST00000517182 106 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.94□□□□□ -1.94
SHOX2O60902 AC109635.4-202ENST00000531666 412 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 AL133271.1-201ENST00000538229 291 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 SETP2-201ENST00000553886 926 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.94□□□□□ -1.94
SHOX2O60902 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.94□□□□□ -1.94
SHOX2O60902 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.94□□□□□ -1.94
SHOX2O60902 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.94□□□□□ -1.94
SHOX2O60902 AL590282.1-201ENST00000610379 1136 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 AC018926.3-201ENST00000618841 406 ntBASIC2.94□□□□□ -1.94
SHOX2O60902 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SHOX2O60902 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 AC010733.2-201ENST00000589496 5702 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 OR56A5-201ENST00000340110 738 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 RNA5SP267-201ENST00000364893 126 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 DEFA7P-201ENST00000382676 285 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 SNORD67-201ENST00000390833 111 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 RNU6-837P-201ENST00000391056 108 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 DSTNP4-201ENST00000399472 474 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 OOSP1P1-201ENST00000423265 274 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.93□□□□□ -1.94
SHOX2O60902 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.93□□□□□ -1.94
SHOX2O60902 AL831737.1-201ENST00000441288 271 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 Z99714.1-201ENST00000450463 807 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.93□□□□□ -1.94
SHOX2O60902 AC073522.1-201ENST00000483312 377 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 RNF138P1-201ENST00000502765 546 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.93□□□□□ -1.94
SHOX2O60902 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHOX2O60902 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.93□□□□□ -1.94
SHOX2O60902 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.93□□□□□ -1.94
SHOX2O60902 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.93□□□□□ -1.94
SHOX2O60902 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.93□□□□□ -1.94
SHOX2O60902 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.93□□□□□ -1.94
SHOX2O60902 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.93□□□□□ -1.94
SHOX2O60902 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.93□□□□□ -1.94
SHOX2O60902 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.93□□□□□ -1.94
SHOX2O60902 MIR4504-201ENST00000577413 92 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 STMN1P1-201ENST00000617809 440 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 AC139713.2-210ENST00000641741 992 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 AC004925.1-201ENST00000624256 2706 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SHOX2O60902 AC104446.1-201ENST00000613728 1321 ntBASIC2.93□□□□□ -1.94
SHOX2O60902 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SHOX2O60902 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHOX2O60902 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHOX2O60902 RNA5SP50-201ENST00000363731 107 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms