Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.19□□□□□ -2.06
URB1O60287 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.19□□□□□ -2.06
URB1O60287 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.19□□□□□ -2.06
URB1O60287 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.19□□□□□ -2.06
URB1O60287 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.19□□□□□ -2.06
URB1O60287 AC009570.1-201ENST00000609599 745 ntBASIC2.19□□□□□ -2.06
URB1O60287 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.19□□□□□ -2.06
URB1O60287 AL450489.1-201ENST00000612071 468 ntBASIC2.19□□□□□ -2.06
URB1O60287 CRYM-AS1-204ENST00000637983 556 ntBASIC2.19□□□□□ -2.06
URB1O60287 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.19□□□□□ -2.06
URB1O60287 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.18□□□□□ -2.06
URB1O60287 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
URB1O60287 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
URB1O60287 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.18□□□□□ -2.06
URB1O60287 RN7SKP140-201ENST00000411196 284 ntBASIC2.18□□□□□ -2.06
URB1O60287 RNU2-6P-201ENST00000411404 190 ntBASIC2.18□□□□□ -2.06
URB1O60287 AC108667.1-201ENST00000428618 249 ntBASIC2.18□□□□□ -2.06
URB1O60287 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC2.18□□□□□ -2.06
URB1O60287 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.18□□□□□ -2.06
URB1O60287 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.18□□□□□ -2.06
URB1O60287 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.18□□□□□ -2.06
URB1O60287 AC012119.1-201ENST00000603184 222 ntBASIC2.18□□□□□ -2.06
URB1O60287 AC017076.1-201ENST00000607613 578 ntBASIC2.18□□□□□ -2.06
URB1O60287 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.18□□□□□ -2.06
URB1O60287 MIR337-201ENST00000362281 93 ntBASIC2.17□□□□□ -2.06
URB1O60287 SNORA51.4-201ENST00000364993 124 ntBASIC2.17□□□□□ -2.06
URB1O60287 RNU1-100P-201ENST00000365255 165 ntBASIC2.17□□□□□ -2.06
URB1O60287 MIR7-2-201ENST00000384970 110 ntBASIC2.17□□□□□ -2.06
URB1O60287 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.17□□□□□ -2.06
URB1O60287 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.17□□□□□ -2.06
URB1O60287 MTCO1P42-201ENST00000457379 726 ntBASIC2.17□□□□□ -2.06
URB1O60287 AC092045.1-201ENST00000495716 1231 ntBASIC2.17□□□□□ -2.06
URB1O60287 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC2.17□□□□□ -2.06
URB1O60287 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
URB1O60287 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.17□□□□□ -2.06
URB1O60287 AC083760.1-201ENST00000589621 670 ntBASIC2.17□□□□□ -2.06
URB1O60287 AC128687.1-201ENST00000605304 619 ntBASIC2.17□□□□□ -2.06
URB1O60287 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.17□□□□□ -2.06
URB1O60287 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
URB1O60287 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
URB1O60287 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.17□□□□□ -2.06
URB1O60287 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC2.17□□□□□ -2.06
URB1O60287 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.17□□□□□ -2.06
URB1O60287 CBX3P5-201ENST00000552017 521 ntBASIC2.17□□□□□ -2.06
URB1O60287 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.17□□□□□ -2.06
URB1O60287 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.17□□□□□ -2.06
URB1O60287 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.17□□□□□ -2.06
URB1O60287 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
URB1O60287 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
URB1O60287 AC066616.2-201ENST00000559334 1481 ntBASIC2.17□□□□□ -2.06
URB1O60287 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
URB1O60287 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
URB1O60287 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.16□□□□□ -2.06
URB1O60287 AL158825.1-201ENST00000414735 521 ntBASIC2.16□□□□□ -2.06
URB1O60287 AIMP1P1-201ENST00000418670 937 ntBASIC2.16□□□□□ -2.06
URB1O60287 AC004866.2-201ENST00000438285 481 ntBASIC2.16□□□□□ -2.06
URB1O60287 HSPE1P18-201ENST00000517602 280 ntBASIC2.16□□□□□ -2.06
URB1O60287 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
URB1O60287 AP000857.1-201ENST00000532151 543 ntBASIC2.16□□□□□ -2.06
URB1O60287 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.16□□□□□ -2.06
URB1O60287 CR589904.2-201ENST00000612533 440 ntBASIC2.16□□□□□ -2.06
URB1O60287 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.16□□□□□ -2.06
URB1O60287 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
URB1O60287 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
URB1O60287 PHKBP1-201ENST00000450951 1951 ntBASIC2.16□□□□□ -2.06
URB1O60287 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
URB1O60287 RAD1P1-201ENST00000231383 813 ntBASIC2.16□□□□□ -2.06
URB1O60287 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.16□□□□□ -2.06
URB1O60287 AC243772.1-201ENST00000451620 410 ntBASIC2.16□□□□□ -2.06
URB1O60287 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.16□□□□□ -2.06
URB1O60287 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.16□□□□□ -2.06
URB1O60287 USP9YP5-201ENST00000511770 630 ntBASIC2.16□□□□□ -2.06
URB1O60287 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.16□□□□□ -2.06
URB1O60287 SNORA9.3-201ENST00000516383 129 ntBASIC2.16□□□□□ -2.06
URB1O60287 TRAV11-201ENST00000539512 339 ntBASIC2.16□□□□□ -2.06
URB1O60287 AK6P1-201ENST00000540219 478 ntBASIC2.16□□□□□ -2.06
URB1O60287 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.16□□□□□ -2.06
URB1O60287 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.16□□□□□ -2.06
URB1O60287 AC004925.1-201ENST00000624256 2706 ntBASIC2.15□□□□□ -2.06
URB1O60287 AL512646.1-201ENST00000269395 1077 ntBASIC2.15□□□□□ -2.06
URB1O60287 MIR378A-201ENST00000362177 66 ntBASIC2.15□□□□□ -2.06
URB1O60287 AL162578.1-201ENST00000406202 378 ntBASIC2.15□□□□□ -2.06
URB1O60287 AC117522.2-201ENST00000510049 657 ntBASIC2.15□□□□□ -2.06
URB1O60287 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.15□□□□□ -2.06
URB1O60287 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.15□□□□□ -2.06
URB1O60287 AC093331.1-201ENST00000521474 169 ntBASIC2.15□□□□□ -2.06
URB1O60287 NPM1P35-201ENST00000533043 868 ntBASIC2.15□□□□□ -2.06
URB1O60287 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
URB1O60287 PDCD5P1-201ENST00000543528 309 ntBASIC2.15□□□□□ -2.06
URB1O60287 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.15□□□□□ -2.06
URB1O60287 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.15□□□□□ -2.06
URB1O60287 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.15□□□□□ -2.06
URB1O60287 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.15□□□□□ -2.06
URB1O60287 AC093673.2-201ENST00000609674 331 ntBASIC2.15□□□□□ -2.06
URB1O60287 AC005539.1-201ENST00000443768 1479 ntBASIC2.15□□□□□ -2.07
URB1O60287 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
URB1O60287 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
URB1O60287 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
URB1O60287 SAGE4P-201ENST00000442271 3381 ntBASIC2.15□□□□□ -2.07
URB1O60287 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms