Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.44□□□□□ -1.38
HOXA2O43364 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.44□□□□□ -1.38
HOXA2O43364 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC6.44□□□□□ -1.38
HOXA2O43364 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.44□□□□□ -1.38
HOXA2O43364 IGBP1P1-201ENST00000554337 1009 ntBASIC6.44□□□□□ -1.38
HOXA2O43364 AL049839.1-201ENST00000556151 657 ntBASIC6.44□□□□□ -1.38
HOXA2O43364 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.44□□□□□ -1.38
HOXA2O43364 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.44□□□□□ -1.38
HOXA2O43364 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
HOXA2O43364 FTX_2.1-201ENST00000618816 94 ntBASIC6.44□□□□□ -1.38
HOXA2O43364 AC130454.1-201ENST00000622948 401 ntBASIC6.44□□□□□ -1.38
HOXA2O43364 CYP4F35P-202ENST00000636121 390 ntBASIC6.44□□□□□ -1.38
HOXA2O43364 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXA2O43364 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXA2O43364 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.44□□□□□ -1.38
HOXA2O43364 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HOXA2O43364 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA2O43364 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA2O43364 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HOXA2O43364 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA2O43364 AL137141.1-201ENST00000624622 4836 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.43□□□□□ -1.38
HOXA2O43364 RNA5SP46-201ENST00000362370 120 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 Y_RNA.26-201ENST00000362539 101 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 Y_RNA.151-201ENST00000363566 112 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 RN7SKP162-201ENST00000363605 345 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 MIR548H3-201ENST00000408771 118 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 AL353997.1-201ENST00000432936 108 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.43□□□□□ -1.38
HOXA2O43364 AC104332.1-201ENST00000440471 797 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.43□□□□□ -1.38
HOXA2O43364 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.43□□□□□ -1.38
HOXA2O43364 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.43□□□□□ -1.38
HOXA2O43364 RPL7P5-201ENST00000471472 736 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 TRBVB-201ENST00000477100 408 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 AC069499.1-201ENST00000489433 509 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.43□□□□□ -1.38
HOXA2O43364 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.43□□□□□ -1.38
HOXA2O43364 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.43□□□□□ -1.38
HOXA2O43364 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.43□□□□□ -1.38
HOXA2O43364 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.43□□□□□ -1.38
HOXA2O43364 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
HOXA2O43364 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA2O43364 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.43□□□□□ -1.38
HOXA2O43364 AC174048.1-201ENST00000603389 144 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 AL589674.2-201ENST00000604304 337 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 AC091193.1-201ENST00000604640 448 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 AP001005.3-201ENST00000622049 129 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA2O43364 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA2O43364 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HOXA2O43364 AL353796.1-201ENST00000561542 3241 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HOXA2O43364 AC008758.3-201ENST00000507003 1829 ntBASIC6.43□□□□□ -1.38
HOXA2O43364 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
HOXA2O43364 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA2O43364 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.43□□□□□ -1.38
HOXA2O43364 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HOXA2O43364 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.43□□□□□ -1.38
HOXA2O43364 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.43□□□□□ -1.38
HOXA2O43364 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA2O43364 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA2O43364 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
HOXA2O43364 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXA2O43364 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA2O43364 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA2O43364 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXA2O43364 AL022323.4-201ENST00000623980 13120 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA2O43364 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXA2O43364 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA2O43364 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA2O43364 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXA2O43364 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA2O43364 Y_RNA.20-201ENST00000362479 113 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 RNU6-806P-201ENST00000365147 105 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HOXA2O43364 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA2O43364 SNORA51.11-201ENST00000384442 131 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HOXA2O43364 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXA2O43364 SYF2P2-201ENST00000417620 583 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 BX276092.3-201ENST00000424182 230 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 AC099677.3-201ENST00000427081 395 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXA2O43364 EEF1A1P1-201ENST00000447052 739 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 AC008264.1-201ENST00000447612 367 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 AL596266.1-201ENST00000448132 400 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 FCF1P4-201ENST00000448326 183 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXA2O43364 PCMTD1P1-201ENST00000455560 355 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 RN7SL629P-201ENST00000489622 285 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 RN7SL466P-201ENST00000497546 295 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 RNU6-570P-201ENST00000517051 105 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 AC090151.1-201ENST00000520784 730 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 AC012339.2-201ENST00000523996 453 ntBASIC6.42□□□□□ -1.38
HOXA2O43364 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXA2O43364 AC022080.3-201ENST00000544433 482 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms