Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TRIM60P18-201ENST00000441518 828 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.73□□□□□ -1.97
UPK1AO00322 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.73□□□□□ -1.97
UPK1AO00322 ELOCP13-201ENST00000443934 329 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 RPL39P40-201ENST00000445481 146 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 AL671855.1-201ENST00000446875 1203 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 RPL37P4-201ENST00000448908 268 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 Z99714.1-201ENST00000450463 807 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.73□□□□□ -1.97
UPK1AO00322 AC104308.1-201ENST00000454621 333 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 BX248409.1-201ENST00000455497 255 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 RPS15AP1-201ENST00000457423 391 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 AP001992.1-205ENST00000462248 379 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 RPL23AP11-201ENST00000475260 469 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.73□□□□□ -1.97
UPK1AO00322 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.73□□□□□ -1.97
UPK1AO00322 RNU6-1073P-201ENST00000517182 106 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 RN7SKP57-201ENST00000517248 293 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.73□□□□□ -1.97
UPK1AO00322 AP004371.1-201ENST00000525240 214 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 AL121603.1-201ENST00000553815 142 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.73□□□□□ -1.97
UPK1AO00322 MTCO3P13-201ENST00000577757 781 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 MIR5195-201ENST00000583555 115 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.73□□□□□ -1.97
UPK1AO00322 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 AC131902.3-201ENST00000611767 581 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 AL590240.3-201ENST00000621416 943 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
UPK1AO00322 AC073346.2-201ENST00000624724 2058 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
UPK1AO00322 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.73□□□□□ -1.97
UPK1AO00322 AC110774.1-201ENST00000623567 2018 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
UPK1AO00322 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
UPK1AO00322 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
UPK1AO00322 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
UPK1AO00322 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.72□□□□□ -1.97
UPK1AO00322 API5P2-201ENST00000397055 1498 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 AC092447.7-201ENST00000422212 1621 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
UPK1AO00322 RNU6-444P-201ENST00000383988 108 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 RNU6-1151P-201ENST00000384684 107 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 RNU6-837P-201ENST00000391056 108 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 ATP5F1P6-201ENST00000402768 767 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 AL138885.1-201ENST00000405921 675 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 AL354719.1-201ENST00000406535 843 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 RPL23AP47-201ENST00000408017 460 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 UBE2V1P9-201ENST00000414760 368 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.72□□□□□ -1.97
UPK1AO00322 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.72□□□□□ -1.97
UPK1AO00322 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.72□□□□□ -1.97
UPK1AO00322 RPL21P2-201ENST00000440049 481 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.72□□□□□ -1.97
UPK1AO00322 AC092170.1-201ENST00000440211 356 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.72□□□□□ -1.97
UPK1AO00322 TPRKBP1-201ENST00000456243 481 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.72□□□□□ -1.97
UPK1AO00322 RPS27AP1-201ENST00000475545 471 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
UPK1AO00322 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.72□□□□□ -1.97
UPK1AO00322 SYF2P1-201ENST00000550658 413 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 H3F3AP1-201ENST00000559984 334 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
UPK1AO00322 AC096586.1-201ENST00000610267 561 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 RMST_10.1-201ENST00000616309 154 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 AL163051.2-201ENST00000618976 735 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 AL118508.4-201ENST00000624142 1176 ntBASIC2.72□□□□□ -1.97
UPK1AO00322 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.72□□□□□ -1.97
UPK1AO00322 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
UPK1AO00322 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
UPK1AO00322 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
UPK1AO00322 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.71□□□□□ -1.98
UPK1AO00322 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.71□□□□□ -1.98
UPK1AO00322 SNORA9.2-201ENST00000365361 133 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
UPK1AO00322 SFR1P1-201ENST00000403720 688 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.71□□□□□ -1.98
UPK1AO00322 RPS3AP9-201ENST00000417027 792 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 KRR1P1-201ENST00000419430 803 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 DUTP6-201ENST00000425573 462 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 AC010881.1-201ENST00000433830 235 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.71□□□□□ -1.98
UPK1AO00322 AL590639.1-201ENST00000456484 337 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 CAB39P1-201ENST00000502277 460 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 ARL4AP2-201ENST00000507378 601 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 RNA5SP341-201ENST00000516261 117 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 IGKV2D-36-201ENST00000518643 226 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.71□□□□□ -1.98
UPK1AO00322 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.71□□□□□ -1.98
UPK1AO00322 FAM60DP-201ENST00000524174 632 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.71□□□□□ -1.98
UPK1AO00322 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.71□□□□□ -1.98
UPK1AO00322 AC109635.4-202ENST00000531666 412 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 AC107016.2-201ENST00000547968 190 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 CR383656.14-201ENST00000551951 406 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms