Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNU4-31P-201ENST00000384211 141 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 SNORD116-12-201ENST00000384468 92 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 Y_RNA.578-201ENST00000390903 88 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 SFR1P1-201ENST00000403720 688 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 RPL7P27-201ENST00000403775 720 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AL592310.1-201ENST00000414330 671 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC091153.1-201ENST00000466297 402 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC026414.1-201ENST00000504046 698 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC011352.3-201ENST00000505162 593 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC110792.2-201ENST00000510278 224 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 PTGES3P3-201ENST00000511479 482 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC109471.1-201ENST00000511631 612 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 RN7SKP283-201ENST00000517197 270 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 MTND3P13-201ENST00000574391 343 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AL445435.1-201ENST00000604232 665 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AP005137.2-201ENST00000609238 400 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC092106.3-201ENST00000611308 722 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC121761.2-201ENST00000617300 689 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC243756.2-201ENST00000618406 463 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC244100.1-202ENST00000621554 382 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 SNORA50A-202ENST00000629536 136 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AL079305.1-201ENST00000623159 3008 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC091152.2-201ENST00000591628 2569 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC073055.1-201ENST00000456901 1621 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 MTND4P8-201ENST00000514997 1362 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC073325.2-201ENST00000339545 159 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 RNU6-1339P-201ENST00000363574 91 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 RNU6-906P-201ENST00000384700 70 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 SNORD15B-201ENST00000384714 146 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 MIR7-3-201ENST00000384898 110 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 RPF2P1-201ENST00000424137 906 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 MTCYBP15-201ENST00000433123 1127 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 MTND1P26-201ENST00000440488 538 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 PTGES3P5-201ENST00000455109 434 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC084024.2-201ENST00000503480 791 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC111193.1-201ENST00000504097 155 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 RNU4-60P-201ENST00000517239 135 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 SOD1P3-201ENST00000518682 454 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC104417.1-201ENST00000523974 751 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AP000619.3-201ENST00000535634 1127 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC011611.1-201ENST00000552179 197 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC083760.1-201ENST00000589621 670 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 VN1R83P-201ENST00000595685 445 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC008687.2-201ENST00000597865 520 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC012119.1-201ENST00000603184 222 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC069200.1-201ENST00000609511 323 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC087683.2-201ENST00000611384 326 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC105227.2-201ENST00000615075 605 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC123767.1-202ENST00000620407 817 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms