Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC026523.2-201ENST00000625039 7739 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC005332.5-201ENST00000591222 2919 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 SAGE2P-201ENST00000420011 2126 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 ZNF807-201ENST00000328088 1707 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 RNU6-562P-201ENST00000362731 107 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 RNU6-128P-201ENST00000383976 107 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 SNORA75B-201ENST00000384053 137 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AC092642.1-201ENST00000392417 425 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 CTSL3P-202ENST00000412179 788 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AC104058.1-201ENST00000448028 297 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AC005077.1-201ENST00000449226 375 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 BX276092.4-201ENST00000452056 248 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 HMGB3P21-201ENST00000452483 547 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 RN7SL254P-201ENST00000460609 284 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 DYNLL1P5-201ENST00000467158 270 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 RN7SKP82-201ENST00000516786 223 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AC021678.3-201ENST00000517893 476 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 IGKV3D-25-201ENST00000519599 235 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 MIR4776-2-201ENST00000580204 80 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AC104687.2-201ENST00000604442 342 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AL355365.1-201ENST00000616480 294 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 FAM27E2-201ENST00000619668 403 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 U4.1-201ENST00000620349 87 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 Z69720.2-201ENST00000624755 279 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 AP000550.3-201ENST00000637734 379 ntBASIC4.81□□□□□ -1.64
SHISA3A0PJX4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHISA3A0PJX4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 MTCO1P24-201ENST00000515438 1558 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 Y_RNA.193-201ENST00000363979 102 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 RNU6-1318P-201ENST00000365389 103 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 RNU11-4P-201ENST00000391149 133 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 RN7SKP16-201ENST00000410180 299 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 RNU4-25P-201ENST00000410569 230 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 Z93019.1-201ENST00000416450 973 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AL139095.3-201ENST00000419672 1203 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AL138899.2-201ENST00000439139 499 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 RPL21P23-201ENST00000446654 460 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 DHFRP3-201ENST00000455595 559 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AC104339.1-201ENST00000465478 348 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms