Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 USP9YP20-201ENST00000419224 558 ntBASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 RPL23AP33-201ENST00000442301 452 ntBASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 AL590399.6-201ENST00000446396 307 ntBASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 AC104058.1-201ENST00000448028 297 ntBASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 RPS29P21-201ENST00000496272 170 ntBASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 AC010265.1-201ENST00000513509 211 ntBASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 CENPUP2-201ENST00000555897 1186 ntBASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 AL590410.1-201ENST00000617925 333 ntBASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 Z99129.2-201ENST00000619967 314 ntBASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 AC008264.2-201ENST00000610193 3731 ntBASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 RNU6-618P-201ENST00000363518 112 ntBASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 OR2B8P-201ENST00000432841 938 ntBASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 RPL37P6-202ENST00000464216 403 ntBASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 HMGB3P15-201ENST00000507326 574 ntBASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 IGHV3-76-201ENST00000522465 295 ntBASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 CKS1BP1-201ENST00000555221 240 ntBASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 CRYM-AS1-204ENST00000637983 556 ntBASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SCN10AQ9Y5Y9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AC023347.2-201ENST00000433994 462 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 UBL5P3-201ENST00000475112 231 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 RN7SKP24-201ENST00000515888 284 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AP000857.1-201ENST00000532151 543 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AC008083.2-201ENST00000546707 476 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 VN1R78P-201ENST00000597393 564 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AP004372.1-201ENST00000604842 844 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AC139769.3-201ENST00000618383 175 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 MIR7843-201ENST00000622274 79 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 MIR4496-201ENST00000635896 61 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 EI24P2-201ENST00000397776 1076 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AC233981.1-201ENST00000423224 461 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 UBE2D3P1-201ENST00000436669 444 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 MED6P1-201ENST00000439659 713 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AL662791.1-201ENST00000441992 928 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 RNU6-237P-201ENST00000515985 71 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 AC005156.1-201ENST00000613371 573 ntBASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
SCN10AQ9Y5Y9 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 AC006020.1-201ENST00000420179 1854 ntBASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 HMGN2P21-201ENST00000447764 270 ntBASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 RPL23AP23-201ENST00000452590 471 ntBASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 AC126182.1-201ENST00000478134 357 ntBASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 AL133271.1-201ENST00000538229 291 ntBASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 AC010620.2-201ENST00000600135 313 ntBASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 uc_338.9-201ENST00000617424 182 ntBASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 U4.3-201ENST00000621047 82 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms