Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 AC092447.7-201ENST00000422212 1621 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 AC016716.1-201ENST00000265882 708 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 OR5H2-201ENST00000355273 945 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 SNORA9-201ENST00000384215 133 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 SNORA48.5-201ENST00000391143 135 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 OFD1P18Y-201ENST00000420889 959 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 RPS20P5-201ENST00000434808 360 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 RPL23AP15-201ENST00000450202 459 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 AC008280.2-201ENST00000455473 307 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 SNORD59.2-201ENST00000516873 68 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 SNORA31.26-201ENST00000517250 137 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 AC022080.3-201ENST00000544433 482 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 CR383656.14-201ENST00000551951 406 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 AL590240.3-201ENST00000621416 943 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 MAPK10-322ENST00000641485 4530 ntBASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HDGFL3Q9Y3E1 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 RNU1-35P-201ENST00000362782 153 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 SNORA27.3-201ENST00000364937 134 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 MIR181B1-201ENST00000385240 110 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 RNU1-101P-201ENST00000391171 127 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 SNORA11.1-201ENST00000408133 129 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 MRPL50P2-201ENST00000416821 482 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC008280.1-201ENST00000418851 412 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 SETP8-201ENST00000435341 628 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 RPL17P49-201ENST00000443728 411 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 RPS26P56-201ENST00000444468 240 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 COX6CP2-201ENST00000444980 225 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 RPL39P40-201ENST00000445481 146 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC068135.1-201ENST00000446164 246 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 NANOGNBP1-201ENST00000448444 480 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AL035407.2-201ENST00000454090 378 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC010285.1-201ENST00000470580 392 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 RPS26P21-201ENST00000475397 348 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC091917.2-201ENST00000505002 744 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 RNA5SP468-201ENST00000516782 93 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 RN7SKP282-201ENST00000516824 299 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 MTCO3P24-201ENST00000572729 782 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC008687.2-201ENST00000597865 520 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC103881.1-201ENST00000603476 538 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC090115.4-201ENST00000609970 188 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC018926.3-201ENST00000618841 406 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC091953.5-201ENST00000622919 233 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC009039.2-201ENST00000624524 529 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 AC092435.3-201ENST00000565538 3654 ntBASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HDGFL3Q9Y3E1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 SNORA51.12-201ENST00000384448 134 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 MIR512-1-201ENST00000384913 84 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 EEF1A1P41-201ENST00000414667 207 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 RPL36P19-201ENST00000430744 301 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 MTND2P21-201ENST00000436242 1042 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 AC093392.2-201ENST00000450682 337 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 HMGB1P15-201ENST00000453854 435 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 AC087879.1-201ENST00000474343 374 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 AP004217.1-201ENST00000480579 346 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 AC117522.3-201ENST00000507974 584 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 AC010374.2-201ENST00000512933 535 ntBASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.59□□□□□ -1.99
HDGFL3Q9Y3E1 SCARNA13-201ENST00000516672 275 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms