Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RPL23AP56-201ENST00000460778 453 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 AP001992.1-205ENST00000462248 379 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 RN7SL826P-201ENST00000479724 288 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 RPL39P36-201ENST00000490784 156 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 MTCO2P30-201ENST00000503662 364 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 RN7SKP46-201ENST00000515942 234 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 AP001922.4-201ENST00000526967 290 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 BRD9P1-201ENST00000529855 560 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 AC021006.3-201ENST00000530771 192 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 AP000907.2-201ENST00000530827 353 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 HMGB1P6-201ENST00000569046 646 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 AC020910.3-201ENST00000603701 874 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 MIR8069-1-201ENST00000616627 86 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 MIR8069-2-201ENST00000621412 86 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 NMD3P1-201ENST00000439704 1488 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 MTND5P17-201ENST00000418405 1603 ntBASIC5.05□□□□□ -1.6
PPARGC1AQ9UBK2 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 Y_RNA.157-201ENST00000363638 102 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 XGY1-201ENST00000381172 446 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 RNU6-1207P-201ENST00000384343 107 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AL357515.1-201ENST00000402967 542 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 RNU6-373P-201ENST00000411247 98 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 TBCAP2-201ENST00000416175 326 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 UQCRBP1-201ENST00000421129 336 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 PSMA6P3-201ENST00000428242 164 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 GPR143P-201ENST00000434155 205 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC105402.2-201ENST00000438503 358 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 RPL12P3-201ENST00000440080 396 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC114495.1-201ENST00000441274 436 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 RN7SL610P-201ENST00000463845 291 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC063943.1-201ENST00000465434 453 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AL136126.1-201ENST00000473603 402 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 ENPP7P9-201ENST00000514456 627 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC107934.1-201ENST00000522215 217 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 PHBP17-201ENST00000528576 541 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 OR5D15P-201ENST00000531671 942 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 OR1F2P-201ENST00000570470 933 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC007038.2-201ENST00000608095 740 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC087385.3-201ENST00000620477 187 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC074029.4-201ENST00000624796 1859 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC010928.1-201ENST00000592477 1447 ntBASIC5.04□□□□□ -1.6
PPARGC1AQ9UBK2 AC011460.1-201ENST00000636268 1834 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms