Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 Y_RNA.453-201ENST00000384223 109 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 SNORD115.1-201ENST00000391109 76 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AL133270.1-201ENST00000402635 279 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 RPS3AP24-201ENST00000407896 734 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 RNU4-55P-201ENST00000410731 137 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC234779.1-201ENST00000425910 285 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AL589872.1-201ENST00000426602 288 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 RPL21P91-201ENST00000429231 479 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 RPL17P49-201ENST00000443728 411 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC079448.1-201ENST00000449377 373 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 TRBV26-201ENST00000456572 344 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AL136126.1-201ENST00000473603 402 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC087879.1-201ENST00000474343 374 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 RPL12P20-201ENST00000475538 479 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 FTH1P24-201ENST00000503502 462 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC019235.1-201ENST00000503847 207 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 RNA5SP446-201ENST00000515955 82 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AP003181.2-201ENST00000528941 181 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 MIR4270-201ENST00000581799 70 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 CKS1BP3-201ENST00000600888 237 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AP002360.3-201ENST00000607673 710 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC104458.1-201ENST00000608243 463 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC015813.4-201ENST00000610469 179 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC068722.2-201ENST00000618734 544 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 RMST_9.1-201ENST00000619945 193 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC092794.2-201ENST00000620933 563 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AL445264.1-201ENST00000621719 171 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AL732618.1-201ENST00000623251 301 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 U3.53-201ENST00000628922 216 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 AC007529.1-201ENST00000418574 2178 ntBASIC4.35□□□□□ -1.71
EHD3Q9NZN3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
EHD3Q9NZN3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AC008725.1-201ENST00000605123 2263 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 GNG5P1-201ENST00000255500 204 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 RNU6-1090P-201ENST00000364065 94 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 SNORA11B-201ENST00000408175 129 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 ELOCP14-201ENST00000428070 331 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 ELOCP7-201ENST00000439968 331 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 RPS4XP4-201ENST00000443195 763 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 RPS26P56-201ENST00000444468 240 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AC005297.2-201ENST00000450430 606 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 HMGB3P21-201ENST00000452483 547 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 RN7SL354P-201ENST00000469282 294 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 OR52A4P-201ENST00000472867 958 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 KCTD9P5-201ENST00000504141 1170 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 SAP18P1-201ENST00000512058 390 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AC007016.1-201ENST00000512110 244 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AC022861.1-201ENST00000522981 663 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 OR5AQ1P-201ENST00000527596 927 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms