Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 ZNF833P-201ENST00000424938 1494 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 MIR649-201ENST00000384843 97 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC073264.1-201ENST00000411508 416 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 RPL7P8-201ENST00000411964 730 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC129850.1-201ENST00000436203 508 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 Z74696.2-201ENST00000436514 498 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC092473.1-201ENST00000441098 221 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 snoU13.7-201ENST00000459220 104 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC068305.1-201ENST00000497406 726 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 RAC1P2-201ENST00000511164 579 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 RNA5SP208-201ENST00000516156 78 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 Vault.1-201ENST00000516474 102 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 RN7SKP83-201ENST00000516512 178 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 OR7K1P-201ENST00000546439 926 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC023161.2-201ENST00000551218 780 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC099489.2-201ENST00000574976 260 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 MIR4644-201ENST00000579929 84 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC053481.4-201ENST00000583164 216 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC243773.3-201ENST00000613270 256 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC092140.2-201ENST00000618027 521 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AL731566.2-201ENST00000618971 317 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AL356266.1-201ENST00000623311 483 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC106871.1-201ENST00000568324 3102 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PCDH9Q9HC56 AC117529.2-201ENST00000512159 2068 ntBASIC3.93□□□□□ -1.78
PCDH9Q9HC56 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 FAM91A3P-201ENST00000456826 2544 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AP001486.2-201ENST00000561652 5113 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AC006504.1-201ENST00000562493 3666 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 Y_RNA.51-201ENST00000362725 102 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 RNU6-660P-201ENST00000364566 109 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 RNA5SP515-201ENST00000364570 118 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 RNU6-213P-201ENST00000384051 104 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 MIR506-201ENST00000384998 124 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 SNORA26.8-201ENST00000391306 124 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AC004022.2-201ENST00000413824 193 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 NPM1P11-201ENST00000417106 855 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 MTCYBP38-201ENST00000417160 1123 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AC096632.1-201ENST00000427395 310 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 BMS1P19-201ENST00000433925 393 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AP000936.2-201ENST00000447151 681 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 RPL26P28-201ENST00000451325 435 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 ZNF114P1-201ENST00000453500 292 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 MTCO3P2-201ENST00000457365 171 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AC087879.1-201ENST00000474343 374 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 VN1R105P-201ENST00000486595 910 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AC239860.2-201ENST00000525886 270 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms