Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RPL39P25-201ENST00000449384 154 ntBASIC7.89□□□□□ -1.15
RNF39Q9H2S5 AC011276.1-201ENST00000469688 323 ntBASIC7.89□□□□□ -1.15
RNF39Q9H2S5 COX6B1P5-201ENST00000509843 249 ntBASIC7.89□□□□□ -1.15
RNF39Q9H2S5 RNA5SP153-201ENST00000516498 76 ntBASIC7.89□□□□□ -1.15
RNF39Q9H2S5 IGLV1-62-201ENST00000518003 441 ntBASIC7.89□□□□□ -1.15
RNF39Q9H2S5 COX6CP16-201ENST00000603667 216 ntBASIC7.89□□□□□ -1.15
RNF39Q9H2S5 RNA5SP439-201ENST00000617595 124 ntBASIC7.89□□□□□ -1.15
RNF39Q9H2S5 MIR548AY-201ENST00000617669 107 ntBASIC7.89□□□□□ -1.15
RNF39Q9H2S5 AL356585.10-201ENST00000641883 123 ntBASIC7.89□□□□□ -1.15
RNF39Q9H2S5 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 Y_RNA.10-201ENST00000362371 110 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 RNU6-487P-201ENST00000365430 104 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 RNA5SP496-201ENST00000391240 109 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 ENSAP1-201ENST00000392855 326 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 FAUP2-201ENST00000394301 401 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 AC005522.1-201ENST00000395416 346 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 FTLP17-201ENST00000432567 525 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 TRBV5-2-201ENST00000489095 273 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 RNU6-830P-201ENST00000516353 107 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 MIR4800-201ENST00000537353 80 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 MIR5571-201ENST00000577998 113 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 RPSAP66-201ENST00000592196 606 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 AL031777.2-201ENST00000611953 196 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 AL121809.2-201ENST00000613169 341 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 MRPL57P1-201ENST00000621486 265 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 AC129502.1-201ENST00000623261 1654 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 AL353807.3-201ENST00000500626 2505 ntBASIC7.88□□□□□ -1.15
RNF39Q9H2S5 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF39Q9H2S5 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 RNU6-1285P-201ENST00000363480 105 ntBASIC7.87□□□□□ -1.15
RNF39Q9H2S5 RNA5SP279-201ENST00000365513 117 ntBASIC7.87□□□□□ -1.15
RNF39Q9H2S5 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 RNU4-69P-201ENST00000410677 143 ntBASIC7.87□□□□□ -1.15
RNF39Q9H2S5 RNU2-70P-201ENST00000410718 179 ntBASIC7.87□□□□□ -1.15
RNF39Q9H2S5 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 AC040975.1-201ENST00000472104 316 ntBASIC7.87□□□□□ -1.15
RNF39Q9H2S5 AC022730.1-201ENST00000473114 568 ntBASIC7.87□□□□□ -1.15
RNF39Q9H2S5 AC117454.1-201ENST00000491120 168 ntBASIC7.87□□□□□ -1.15
RNF39Q9H2S5 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.87□□□□□ -1.15
RNF39Q9H2S5 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.87□□□□□ -1.15
RNF39Q9H2S5 ACTG1P15-201ENST00000570019 1063 ntBASIC7.87□□□□□ -1.15
RNF39Q9H2S5 RN7SL426P-201ENST00000579106 295 ntBASIC7.87□□□□□ -1.15
RNF39Q9H2S5 SIGLEC31P-201ENST00000594237 551 ntBASIC7.87□□□□□ -1.15
RNF39Q9H2S5 AC005191.1-201ENST00000603950 358 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms