Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC008250.2-201ENST00000615261 205 ntBASIC4.12□□□□□ -1.75
TRIM2Q9C040 AC116165.2-201ENST00000616705 206 ntBASIC4.12□□□□□ -1.75
TRIM2Q9C040 AC095031.1-201ENST00000623685 672 ntBASIC4.12□□□□□ -1.75
TRIM2Q9C040 AC055839.1-201ENST00000634467 498 ntBASIC4.12□□□□□ -1.75
TRIM2Q9C040 AC068137.3-201ENST00000639191 341 ntBASIC4.12□□□□□ -1.75
TRIM2Q9C040 AC073869.6-201ENST00000640656 341 ntBASIC4.12□□□□□ -1.75
TRIM2Q9C040 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM2Q9C040 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM2Q9C040 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM2Q9C040 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM2Q9C040 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM2Q9C040 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TRIM2Q9C040 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
TRIM2Q9C040 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TRIM2Q9C040 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM2Q9C040 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM2Q9C040 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM2Q9C040 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM2Q9C040 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AC097504.1-201ENST00000515103 2415 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM2Q9C040 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM2Q9C040 RNA5SP307-201ENST00000362863 116 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 RNU1-130P-201ENST00000363930 160 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 RNU6-259P-201ENST00000383999 107 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 Y_RNA.548-201ENST00000384656 105 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 RNA5SP397-201ENST00000391323 118 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM2Q9C040 Y_RNA.608-201ENST00000410647 95 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 HMGB3P23-201ENST00000414981 585 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 CYP4F29P-201ENST00000420685 446 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 AC009480.2-201ENST00000422916 432 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 RPS3AP54-201ENST00000435535 734 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 CEACAMP6-201ENST00000452007 574 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AC093899.1-201ENST00000457984 376 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 snoU13.1-201ENST00000459157 104 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AK3P4-201ENST00000504283 583 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 NDUFB4P2-201ENST00000509515 391 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AC005798.1-201ENST00000513715 387 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 HIGD1AP3-201ENST00000515857 278 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 RN7SKP298-201ENST00000515950 94 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 RNA5SP309-201ENST00000516670 106 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 OR4G1P-201ENST00000588632 938 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 RPL23AP92-201ENST00000603609 255 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 AC010201.1-201ENST00000605051 540 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AC007546.2-201ENST00000623996 360 ntBASIC4.11□□□□□ -1.75
TRIM2Q9C040 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM2Q9C040 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
TRIM2Q9C040 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM2Q9C040 AL049780.3-201ENST00000624612 1583 ntBASIC4.1□□□□□ -1.75
TRIM2Q9C040 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM2Q9C040 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM2Q9C040 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM2Q9C040 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM2Q9C040 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM2Q9C040 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
TRIM2Q9C040 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM2Q9C040 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM2Q9C040 RPS3AP36-201ENST00000398190 775 ntBASIC4.1□□□□□ -1.75
TRIM2Q9C040 RPS20P2-201ENST00000402520 389 ntBASIC4.1□□□□□ -1.75
TRIM2Q9C040 SNORA74C-2-201ENST00000411179 201 ntBASIC4.1□□□□□ -1.75
TRIM2Q9C040 RPS3AP3-201ENST00000411933 242 ntBASIC4.1□□□□□ -1.75
TRIM2Q9C040 RPL31P2-201ENST00000413849 377 ntBASIC4.1□□□□□ -1.75
TRIM2Q9C040 Z97055.1-201ENST00000419730 712 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms