Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC073073.1-201ENST00000493920 463 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 OR4R1P-201ENST00000529879 463 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AP004607.2-201ENST00000533949 322 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 RPL21P12-201ENST00000559810 515 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 HMGB1P6-201ENST00000569046 646 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 OR1F2P-201ENST00000570470 933 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AC133644.2-201ENST00000608142 540 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 MIR6130-201ENST00000619419 109 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 DUXAP9-208ENST00000622815 614 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AL645937.1-201ENST00000641739 1652 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 SCN1A-220ENST00000641603 12506 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 HSPE1P11-201ENST00000339579 310 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 MIR133B-201ENST00000362210 119 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 RNU6-877P-201ENST00000383868 107 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 RNA5SP339-201ENST00000390987 122 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 HSPA8P15-201ENST00000401676 786 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AL109755.1-201ENST00000401791 649 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AL133270.1-201ENST00000402635 279 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 RNU4-65P-201ENST00000410473 140 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 RNA5SP107-201ENST00000411358 122 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 GSTM5P1-201ENST00000434751 660 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AL138799.3-201ENST00000438968 350 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AC006480.1-201ENST00000449887 378 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AP000942.1-201ENST00000463969 747 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 NDUFB5P1-201ENST00000508134 564 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AC026801.2-201ENST00000515352 425 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 HMGN1P28-201ENST00000521340 364 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AL121579.1-201ENST00000555129 305 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AC034105.3-201ENST00000565294 442 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 MIR4293-201ENST00000584305 78 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AC008752.3-201ENST00000588113 712 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AL020991.1-201ENST00000612314 373 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 MIR8069-1-201ENST00000616627 86 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AL603758.1-201ENST00000618654 241 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 MIR8069-2-201ENST00000621412 86 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AC244100.1-202ENST00000621554 382 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 FER-210ENST00000628534 558 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 AC011493.1-201ENST00000596753 1632 ntBASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
TRIM55Q9BYV6 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM55Q9BYV6 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM55Q9BYV6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM55Q9BYV6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM55Q9BYV6 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM55Q9BYV6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM55Q9BYV6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM55Q9BYV6 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
TRIM55Q9BYV6 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM55Q9BYV6 AC090337.1-201ENST00000579651 2074 ntBASIC5.13□□□□□ -1.59
TRIM55Q9BYV6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM55Q9BYV6 Y_RNA.22-201ENST00000362492 102 ntBASIC5.13□□□□□ -1.59
TRIM55Q9BYV6 Y_RNA.38-201ENST00000362617 102 ntBASIC5.13□□□□□ -1.59
TRIM55Q9BYV6 SNORA16A-201ENST00000384342 137 ntBASIC5.13□□□□□ -1.59
TRIM55Q9BYV6 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM55Q9BYV6 AL645733.1-201ENST00000402250 217 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms