Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.36□□□□□ -1.87
SSX3Q99909 SNORA31.8-201ENST00000516327 108 ntBASIC3.36□□□□□ -1.87
SSX3Q99909 AC084824.1-201ENST00000550917 1005 ntBASIC3.36□□□□□ -1.87
SSX3Q99909 NBEAP1-201ENST00000554452 979 ntBASIC3.36□□□□□ -1.87
SSX3Q99909 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.36□□□□□ -1.87
SSX3Q99909 BNIP3P5-201ENST00000562290 498 ntBASIC3.36□□□□□ -1.87
SSX3Q99909 AL845331.3-202ENST00000562856 261 ntBASIC3.36□□□□□ -1.87
SSX3Q99909 AC009712.1-201ENST00000564938 316 ntBASIC3.36□□□□□ -1.87
SSX3Q99909 AC022655.2-201ENST00000577280 318 ntBASIC3.36□□□□□ -1.87
SSX3Q99909 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.36□□□□□ -1.87
SSX3Q99909 BDH2P1-201ENST00000602288 736 ntBASIC3.36□□□□□ -1.87
SSX3Q99909 AC004987.4-201ENST00000603383 338 ntBASIC3.36□□□□□ -1.87
SSX3Q99909 AL451086.1-201ENST00000605596 223 ntBASIC3.36□□□□□ -1.87
SSX3Q99909 AC008962.1-201ENST00000605729 304 ntBASIC3.36□□□□□ -1.87
SSX3Q99909 AC007349.4-201ENST00000608114 532 ntBASIC3.36□□□□□ -1.87
SSX3Q99909 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.36□□□□□ -1.87
SSX3Q99909 AC097478.2-201ENST00000610572 514 ntBASIC3.36□□□□□ -1.87
SSX3Q99909 AC064801.1-201ENST00000612025 407 ntBASIC3.36□□□□□ -1.87
SSX3Q99909 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.36□□□□□ -1.87
SSX3Q99909 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.36□□□□□ -1.87
SSX3Q99909 MIR7153-201ENST00000637758 57 ntBASIC3.36□□□□□ -1.87
SSX3Q99909 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSX3Q99909 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSX3Q99909 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSX3Q99909 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.36□□□□□ -1.87
SSX3Q99909 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSX3Q99909 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
SSX3Q99909 LINC00561-201ENST00000565815 2738 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.35□□□□□ -1.87
SSX3Q99909 AL390862.1-201ENST00000635467 1469 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSX3Q99909 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSX3Q99909 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSX3Q99909 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSX3Q99909 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSX3Q99909 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSX3Q99909 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSX3Q99909 RNA5SP130-201ENST00000364431 114 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 RNA5SP515-201ENST00000364570 118 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 RNU6-621P-201ENST00000364752 109 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 MIR513B-201ENST00000385136 84 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.35□□□□□ -1.87
SSX3Q99909 AL139421.1-201ENST00000423010 169 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.35□□□□□ -1.87
SSX3Q99909 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.35□□□□□ -1.87
SSX3Q99909 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.35□□□□□ -1.87
SSX3Q99909 AC104308.1-201ENST00000454621 333 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 RNA5SP246-201ENST00000458909 119 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 snoU109.4-201ENST00000458953 143 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 RPL38P1-201ENST00000460914 211 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 AP002884.2-201ENST00000471647 395 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SSX3Q99909 HMGN2P13-201ENST00000476476 274 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.35□□□□□ -1.87
SSX3Q99909 FABP5P12-201ENST00000515543 389 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 IGHV3-76-201ENST00000522465 295 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 AP001372.4-201ENST00000524889 472 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.35□□□□□ -1.87
SSX3Q99909 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.35□□□□□ -1.87
SSX3Q99909 AC024224.1-201ENST00000538284 609 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 OR8R1P-201ENST00000543943 764 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.35□□□□□ -1.87
SSX3Q99909 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSX3Q99909 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.35□□□□□ -1.87
SSX3Q99909 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.35□□□□□ -1.87
SSX3Q99909 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.35□□□□□ -1.87
SSX3Q99909 AC010738.1-201ENST00000604970 987 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 AC080013.3-201ENST00000606839 578 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 AC080013.4-201ENST00000607624 649 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 VIS1.1-201ENST00000610517 203 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 MIR6867-201ENST00000610636 67 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 AC099778.2-201ENST00000610904 211 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SSX3Q99909 AC231657.1-201ENST00000624313 397 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 RNA5SP196-201ENST00000625967 102 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.35□□□□□ -1.87
SSX3Q99909 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
SSX3Q99909 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.35□□□□□ -1.87
SSX3Q99909 OR5BR1P-201ENST00000524992 1330 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 AC002546.1-201ENST00000588041 2504 ntBASIC3.35□□□□□ -1.87
SSX3Q99909 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSX3Q99909 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSX3Q99909 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSX3Q99909 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSX3Q99909 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSX3Q99909 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SSX3Q99909 RNU11-4P-201ENST00000391149 133 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 CYCSP45-201ENST00000402289 315 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 RPL21P65-201ENST00000406094 466 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AC019178.2-201ENST00000423595 505 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 OR5BE1P-201ENST00000425977 939 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.34□□□□□ -1.87
SSX3Q99909 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.34□□□□□ -1.87
SSX3Q99909 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.34□□□□□ -1.87
SSX3Q99909 AL359073.1-201ENST00000448036 403 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 RPL26P28-201ENST00000451325 435 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 SNORD11.1-201ENST00000459482 85 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AC010468.1-201ENST00000461022 817 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AC110792.1-201ENST00000491826 472 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms