Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC234781.4-201ENST00000419384 244 ntBASIC3.84□□□□□ -1.8
IFT140Q96RY7 AC048351.1-201ENST00000420064 602 ntBASIC3.84□□□□□ -1.8
IFT140Q96RY7 RPL36AP21-201ENST00000490372 323 ntBASIC3.84□□□□□ -1.8
IFT140Q96RY7 AC021733.2-201ENST00000518830 497 ntBASIC3.84□□□□□ -1.8
IFT140Q96RY7 AC061975.8-201ENST00000587058 721 ntBASIC3.84□□□□□ -1.8
IFT140Q96RY7 AC023043.2-201ENST00000589678 1026 ntBASIC3.84□□□□□ -1.8
IFT140Q96RY7 snoU13.31-201ENST00000607291 104 ntBASIC3.84□□□□□ -1.8
IFT140Q96RY7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.84□□□□□ -1.8
IFT140Q96RY7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.84□□□□□ -1.8
IFT140Q96RY7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
IFT140Q96RY7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
IFT140Q96RY7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
IFT140Q96RY7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.84□□□□□ -1.8
IFT140Q96RY7 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.83□□□□□ -1.8
IFT140Q96RY7 SNORA41-201ENST00000384675 132 ntBASIC3.83□□□□□ -1.8
IFT140Q96RY7 MTCO2P17-201ENST00000424336 677 ntBASIC3.83□□□□□ -1.8
IFT140Q96RY7 MTCYBP20-201ENST00000524239 1129 ntBASIC3.83□□□□□ -1.8
IFT140Q96RY7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.83□□□□□ -1.8
IFT140Q96RY7 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.83□□□□□ -1.8
IFT140Q96RY7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.83□□□□□ -1.8
IFT140Q96RY7 Z99496.1-201ENST00000469424 1477 ntBASIC3.83□□□□□ -1.8
IFT140Q96RY7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
IFT140Q96RY7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
IFT140Q96RY7 Y_RNA.40-201ENST00000362645 93 ntBASIC3.82□□□□□ -1.8
IFT140Q96RY7 SNORA17.3-201ENST00000391159 129 ntBASIC3.82□□□□□ -1.8
IFT140Q96RY7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.82□□□□□ -1.8
IFT140Q96RY7 AP000893.1-201ENST00000474462 794 ntBASIC3.82□□□□□ -1.8
IFT140Q96RY7 AC091917.2-201ENST00000505002 744 ntBASIC3.82□□□□□ -1.8
IFT140Q96RY7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.82□□□□□ -1.8
IFT140Q96RY7 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.82□□□□□ -1.8
IFT140Q96RY7 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
IFT140Q96RY7 TRAV11-201ENST00000539512 339 ntBASIC3.82□□□□□ -1.8
IFT140Q96RY7 OR4K7P-201ENST00000580232 945 ntBASIC3.82□□□□□ -1.8
IFT140Q96RY7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.82□□□□□ -1.8
IFT140Q96RY7 AC009570.1-201ENST00000609599 745 ntBASIC3.82□□□□□ -1.8
IFT140Q96RY7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
IFT140Q96RY7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
IFT140Q96RY7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
IFT140Q96RY7 RNA5SP239-201ENST00000410218 129 ntBASIC3.81□□□□□ -1.8
IFT140Q96RY7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.81□□□□□ -1.8
IFT140Q96RY7 CYCSP49-201ENST00000420810 319 ntBASIC3.81□□□□□ -1.8
IFT140Q96RY7 NDUFS5P3-201ENST00000450668 321 ntBASIC3.81□□□□□ -1.8
IFT140Q96RY7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.81□□□□□ -1.8
IFT140Q96RY7 AC021146.5-201ENST00000503544 545 ntBASIC3.81□□□□□ -1.8
IFT140Q96RY7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.81□□□□□ -1.8
IFT140Q96RY7 AC011494.1-201ENST00000596454 237 ntBASIC3.81□□□□□ -1.8
IFT140Q96RY7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.81□□□□□ -1.8
IFT140Q96RY7 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.81□□□□□ -1.8
IFT140Q96RY7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
IFT140Q96RY7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
IFT140Q96RY7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
IFT140Q96RY7 AL590004.2-201ENST00000404787 371 ntBASIC3.8□□□□□ -1.8
IFT140Q96RY7 MTCO3P31-201ENST00000405526 789 ntBASIC3.8□□□□□ -1.8
IFT140Q96RY7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.8□□□□□ -1.8
IFT140Q96RY7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.8□□□□□ -1.8
IFT140Q96RY7 AC092427.1-202ENST00000430569 476 ntBASIC3.8□□□□□ -1.8
IFT140Q96RY7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.8□□□□□ -1.8
IFT140Q96RY7 FAM92A1P2-202ENST00000504766 877 ntBASIC3.8□□□□□ -1.8
IFT140Q96RY7 AC010198.2-201ENST00000550612 259 ntBASIC3.8□□□□□ -1.8
IFT140Q96RY7 AC055876.1-202ENST00000567053 138 ntBASIC3.8□□□□□ -1.8
IFT140Q96RY7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.8□□□□□ -1.8
IFT140Q96RY7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
IFT140Q96RY7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
IFT140Q96RY7 MTND5P19-201ENST00000424872 1794 ntBASIC3.8□□□□□ -1.8
IFT140Q96RY7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
IFT140Q96RY7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
IFT140Q96RY7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
IFT140Q96RY7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
IFT140Q96RY7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
IFT140Q96RY7 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.79□□□□□ -1.8
IFT140Q96RY7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
IFT140Q96RY7 MIR181B1-201ENST00000385240 110 ntBASIC3.79□□□□□ -1.8
IFT140Q96RY7 RNU6-321P-201ENST00000410912 106 ntBASIC3.79□□□□□ -1.8
IFT140Q96RY7 AC108667.1-201ENST00000428618 249 ntBASIC3.79□□□□□ -1.8
IFT140Q96RY7 RPL23AP74-201ENST00000437246 471 ntBASIC3.79□□□□□ -1.8
IFT140Q96RY7 AC147055.1-201ENST00000509261 750 ntBASIC3.79□□□□□ -1.8
IFT140Q96RY7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
IFT140Q96RY7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.79□□□□□ -1.8
IFT140Q96RY7 AC068339.2-201ENST00000534395 618 ntBASIC3.79□□□□□ -1.8
IFT140Q96RY7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.79□□□□□ -1.8
IFT140Q96RY7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.79□□□□□ -1.8
IFT140Q96RY7 AP001521.1-201ENST00000609150 300 ntBASIC3.79□□□□□ -1.8
IFT140Q96RY7 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.79□□□□□ -1.8
IFT140Q96RY7 AC025125.1-201ENST00000624743 1922 ntBASIC3.79□□□□□ -1.8
IFT140Q96RY7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.79□□□□□ -1.8
IFT140Q96RY7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
IFT140Q96RY7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
IFT140Q96RY7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.79□□□□□ -1.8
IFT140Q96RY7 NPM1P10-201ENST00000398310 865 ntBASIC3.79□□□□□ -1.8
IFT140Q96RY7 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.79□□□□□ -1.8
IFT140Q96RY7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.79□□□□□ -1.8
IFT140Q96RY7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.79□□□□□ -1.8
IFT140Q96RY7 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.79□□□□□ -1.8
IFT140Q96RY7 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.79□□□□□ -1.8
IFT140Q96RY7 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.79□□□□□ -1.8
IFT140Q96RY7 SNORD6-201ENST00000365444 73 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 RNU6-178P-201ENST00000384631 104 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 AL450338.1-201ENST00000407987 512 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 RNU2-2P-201ENST00000410396 191 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 PTP4A1P7-201ENST00000423476 514 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms