Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SNX18Q96RF0 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX18Q96RF0 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 ASNSP1-201ENST00000518311 1939 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SNX18Q96RF0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SNX18Q96RF0 RNU6-28P-201ENST00000362378 107 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 Y_RNA.303-201ENST00000364998 94 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 RNU6-744P-201ENST00000365557 107 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 RNA5SP87-201ENST00000384155 118 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 Y_RNA.450-201ENST00000384198 113 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 RNU6-1316P-201ENST00000384242 108 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 MTCO3P40-201ENST00000392516 676 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 CALM2P3-201ENST00000400429 449 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 CIR1P3-201ENST00000405137 479 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 FCF1P10-201ENST00000407590 479 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC016397.1-201ENST00000412463 242 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC069157.1-201ENST00000421749 137 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 AL592293.2-201ENST00000422292 996 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC009480.2-201ENST00000422916 432 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 RPL30P3-201ENST00000424262 333 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 RPEP2-201ENST00000432149 701 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 RPS20P1-201ENST00000434853 354 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 AL662791.1-201ENST00000441992 928 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 RPL17P49-201ENST00000443728 411 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 VN1R34P-201ENST00000447387 883 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 FABP3P2-201ENST00000453169 399 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 RPS29P33-201ENST00000456717 146 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 RN7SL860P-201ENST00000473738 223 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 RPS3AP14-201ENST00000483907 780 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 RPS26P15-201ENST00000488067 348 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 AP001025.2-201ENST00000490908 477 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC006390.1-201ENST00000508068 283 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 PTGES3P3-201ENST00000511479 482 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 RNU6-1003P-201ENST00000517099 105 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC107016.1-201ENST00000550463 337 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC053481.3-201ENST00000577881 843 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 MIR3667-201ENST00000581025 74 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 MIR3682-201ENST00000581338 84 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC209154.1-201ENST00000582156 337 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX18Q96RF0 AL359999.1-201ENST00000604513 294 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 AL391358.1-201ENST00000605342 190 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 AL390208.1-201ENST00000605885 644 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC113194.1-201ENST00000606037 500 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 FAM27B-201ENST00000610601 213 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC103858.2-201ENST00000621471 543 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC004009.2-201ENST00000623016 728 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 PISRT1-201ENST00000626175 531 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SNX18Q96RF0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SNX18Q96RF0 AC016588.2-201ENST00000632484 3021 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SNX18Q96RF0 AL136164.3-201ENST00000624429 3978 ntBASIC4.2□□□□□ -1.74
SNX18Q96RF0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SNX18Q96RF0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SNX18Q96RF0 SAMMSON-226ENST00000642089 1582 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX18Q96RF0 AC027290.2-201ENST00000623210 18662 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 AC011155.1-201ENST00000316512 456 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 Y_RNA.9-201ENST00000362354 101 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 RNU1-130P-201ENST00000363930 160 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 SNORD82-201ENST00000365530 70 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX18Q96RF0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 SNORD115.1-201ENST00000391109 76 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX18Q96RF0 MIR1277-201ENST00000408536 78 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 USP9YP6-201ENST00000413550 854 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 RPL31P45-201ENST00000419532 356 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 AC012065.2-201ENST00000421295 375 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 AL589872.1-201ENST00000426602 288 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 ARPC3P1-201ENST00000437218 533 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 RPL7P28-201ENST00000437739 740 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 AL512326.1-201ENST00000443050 721 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms