Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 Z95327.2-201ENST00000414579 1873 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 RNU6-552P-201ENST00000362869 119 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 Y_RNA.373-201ENST00000365600 103 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 MIR606-201ENST00000384851 96 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 Y_RNA.579-201ENST00000390939 94 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 RNU6-903P-201ENST00000391270 109 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 SNORA75.4-201ENST00000391278 119 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 MIR548P-201ENST00000408336 84 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 RNU4-34P-201ENST00000410431 124 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 RNA5SP345-201ENST00000410646 108 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AC010733.1-201ENST00000451515 401 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AC009127.1-201ENST00000467090 155 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 COX7A2P2-201ENST00000505291 250 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AC116562.3-201ENST00000506136 177 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AC092436.1-201ENST00000506450 503 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 FAM206BP-201ENST00000510179 541 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 RNU7-51P-201ENST00000516560 62 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 HMGB1P41-201ENST00000520234 440 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AC068587.5-201ENST00000528506 175 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 LSM3P2-201ENST00000551246 273 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 MIR4775-201ENST00000581168 75 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AL162431.4-201ENST00000604674 411 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AC103710.3-201ENST00000608157 948 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AC004908.2-201ENST00000609090 574 ntBASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTCHD1Q96NR3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AL034549.2-201ENST00000618285 3373 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 RPL23P2-201ENST00000320371 421 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 Y_RNA.128-201ENST00000363391 112 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 RNU6-641P-201ENST00000384006 107 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 RNU6-738P-201ENST00000384531 106 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 RN7SKP126-201ENST00000411143 300 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AL161631.1-201ENST00000417933 486 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 RPS26P47-201ENST00000427219 348 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 OR2AS1P-201ENST00000427827 319 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AL161722.2-201ENST00000434731 981 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 RPS29P10-201ENST00000439197 166 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AL389915.2-201ENST00000454576 441 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 PPIAP21-201ENST00000464473 501 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 RN7SL222P-201ENST00000476452 299 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 RPS24P16-201ENST00000497294 392 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AC068305.1-201ENST00000497406 726 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AC008638.1-201ENST00000506035 866 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 KLHL2P1-201ENST00000508691 521 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 RNU2-10P-201ENST00000516375 211 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AC024940.3-201ENST00000538551 316 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AL359219.2-201ENST00000555184 348 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 FRG2DP-202ENST00000566967 323 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 RN7SL290P-201ENST00000578661 300 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 OR7E18P-201ENST00000592589 702 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AC013244.1-201ENST00000604279 193 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AL121612.2-201ENST00000612261 482 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms