Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 AC021006.3-201ENST00000530771 192 ntBASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 AL157687.1-201ENST00000554853 619 ntBASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 AL031320.1-201ENST00000604177 357 ntBASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 AL035413.2-201ENST00000604801 525 ntBASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 AL451044.1-201ENST00000604867 238 ntBASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 AL590282.1-201ENST00000610379 1136 ntBASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 AL442067.2-201ENST00000614033 363 ntBASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 MLECP1-201ENST00000615893 709 ntBASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 AC009237.17-201ENST00000618111 748 ntBASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 AC100778.3-201ENST00000580060 1750 ntBASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.8□□□□□ -1.64
CLIP3Q96DZ5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 Y_RNA.162-201ENST00000363683 102 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 Y_RNA.234-201ENST00000364409 97 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 Y_RNA.296-201ENST00000364930 108 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 Y_RNA.529-201ENST00000384586 119 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 SNORA48.4-201ENST00000391089 134 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 AL356421.1-201ENST00000403255 413 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 AL356776.1-201ENST00000406574 447 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 MTCO1P20-201ENST00000425366 358 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 MRPS18BP2-201ENST00000434310 759 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 AL451074.3-201ENST00000437709 472 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 BX842559.2-201ENST00000451418 605 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 RPL38P1-201ENST00000460914 211 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 AC021660.1-201ENST00000465006 554 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 RPS3AP14-201ENST00000483907 780 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 BTF3P13-201ENST00000513224 490 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 AC008694.2-201ENST00000517591 306 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 DEFB109D-201ENST00000529497 240 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 AC020910.2-201ENST00000603635 610 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 MIR6748-201ENST00000610433 71 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 MIR6820-201ENST00000611508 62 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 AC087385.3-201ENST00000620477 187 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 SALL4P2-201ENST00000423288 2910 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLIP3Q96DZ5 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AC087190.4-201ENST00000574616 8334 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AC090337.1-201ENST00000579651 2074 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 Y_RNA.573-201ENST00000384763 105 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 RNU6-332P-201ENST00000391193 108 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AL035079.1-201ENST00000405210 287 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 GSTA9P-201ENST00000406231 611 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 RNU4-78P-201ENST00000410940 126 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 SDCBPP3-201ENST00000419629 891 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 PGBD4P3-201ENST00000440731 581 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AC093019.1-201ENST00000443135 252 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 MTND4P19-201ENST00000446659 478 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AC053481.1-201ENST00000467217 306 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 NIPA2P2-201ENST00000496376 1083 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms