Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RPL23AP97-201ENST00000568955 471 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC099489.2-201ENST00000574976 260 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC012409.3-201ENST00000611343 981 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AP005019.3-201ENST00000620418 560 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CTHRC1Q96CG8 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.15□□□□□ -1.74
CTHRC1Q96CG8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
CTHRC1Q96CG8 NOL8P1-201ENST00000508336 3529 ntBASIC4.15□□□□□ -1.74
CTHRC1Q96CG8 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CTHRC1Q96CG8 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.15□□□□□ -1.74
CTHRC1Q96CG8 IQCB2P-201ENST00000401788 1633 ntBASIC4.15□□□□□ -1.74
CTHRC1Q96CG8 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 MIR3065-201ENST00000390137 79 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AL049693.1-201ENST00000402760 611 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AC127391.1-201ENST00000411737 98 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 RPL36AP36-201ENST00000418616 301 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 USP9YP36-201ENST00000424581 829 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AC233728.2-201ENST00000425348 757 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 DNAJC19P7-201ENST00000428811 344 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 OR51AB1P-201ENST00000429046 620 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AL358934.1-201ENST00000432346 324 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 MTCYBP45-201ENST00000435243 565 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AC108734.1-201ENST00000439549 399 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AC114495.1-201ENST00000441274 436 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 ARL2BPP10-201ENST00000446487 531 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AC003071.1-201ENST00000451219 789 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 RPS20P24-201ENST00000457473 361 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 RPS4XP10-201ENST00000465034 731 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AL672167.3-201ENST00000465951 960 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AC146507.1-201ENST00000468335 354 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 RPL31P58-201ENST00000469001 379 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 RPL23AP41-201ENST00000484754 458 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 HMGB1P29-201ENST00000505659 499 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 PTGES3P3-201ENST00000511479 482 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 RNA5SP497-201ENST00000516081 97 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 RAB9BP1-201ENST00000519581 626 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AP003181.2-201ENST00000528941 181 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 OR5BC1P-201ENST00000529327 739 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 RPS3AP4-201ENST00000555161 764 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 SNORA59B-202ENST00000578183 701 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 MIR4715-201ENST00000584117 79 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 SLC25A36P1-201ENST00000590111 465 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AP002360.4-201ENST00000606980 481 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AL133173.2-201ENST00000614270 90 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 AL157786.1-207ENST00000627771 695 ntBASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.15□□□□□ -1.75
CTHRC1Q96CG8 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AP000542.2-201ENST00000623199 6179 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AC024560.2-201ENST00000507981 1497 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 Y_RNA.234-201ENST00000364409 97 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 Y_RNA.372-201ENST00000365599 102 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 RNU1-44P-201ENST00000384453 163 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 MTCO3P40-201ENST00000392516 676 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AL590002.1-201ENST00000406554 418 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 RNU6-195P-201ENST00000411352 109 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 ELOCP19-201ENST00000411919 318 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AL139095.3-201ENST00000419672 1203 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms