Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
FNDC9Q8TBE3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
FNDC9Q8TBE3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.54□□□□□ -2
FNDC9Q8TBE3 OR5J1P-201ENST00000313544 939 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 SNORA5B-201ENST00000363786 132 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.54□□□□□ -2
FNDC9Q8TBE3 MIR887-201ENST00000401258 79 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
FNDC9Q8TBE3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.54□□□□□ -2
FNDC9Q8TBE3 AL590103.1-201ENST00000434488 307 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.54□□□□□ -2
FNDC9Q8TBE3 AC105272.1-201ENST00000438604 198 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 AC000041.1-201ENST00000439655 175 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 AL592437.1-201ENST00000443781 492 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.54□□□□□ -2
FNDC9Q8TBE3 RPL7P52-201ENST00000449200 742 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 SSXP4-201ENST00000451349 245 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 RPS15AP1-201ENST00000457423 391 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.54□□□□□ -2
FNDC9Q8TBE3 AC126121.1-201ENST00000482313 553 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.54□□□□□ -2
FNDC9Q8TBE3 RPL7L1P13-201ENST00000511702 739 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.54□□□□□ -2
FNDC9Q8TBE3 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.54□□□□□ -2
FNDC9Q8TBE3 RN7SKP244-201ENST00000516513 307 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.54□□□□□ -2
FNDC9Q8TBE3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.54□□□□□ -2
FNDC9Q8TBE3 AC007536.1-201ENST00000533382 349 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.54□□□□□ -2
FNDC9Q8TBE3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.54□□□□□ -2
FNDC9Q8TBE3 AC074029.1-201ENST00000552531 1044 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 GTF3AP2-201ENST00000557014 266 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 AC034105.3-201ENST00000565294 442 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.54□□□□□ -2
FNDC9Q8TBE3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
FNDC9Q8TBE3 CBX3P2-202ENST00000583365 535 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.54□□□□□ -2
FNDC9Q8TBE3 CR589904.2-201ENST00000612533 440 ntBASIC2.54□□□□□ -2
FNDC9Q8TBE3 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.54□□□□□ -2
FNDC9Q8TBE3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.54□□□□□ -2
FNDC9Q8TBE3 MTCO1P24-201ENST00000515438 1558 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.53□□□□□ -2
FNDC9Q8TBE3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.53□□□□□ -2
FNDC9Q8TBE3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.53□□□□□ -2
FNDC9Q8TBE3 RNU6-600P-201ENST00000362524 99 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 Y_RNA.111-201ENST00000363248 100 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.53□□□□□ -2
FNDC9Q8TBE3 RPS3AP26-201ENST00000398259 784 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 PRRC2CP1-201ENST00000404428 159 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 AL031121.1-201ENST00000406553 254 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 RNA5SP129-201ENST00000410276 118 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 AL592148.1-201ENST00000413568 445 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 AL451074.5-201ENST00000415894 435 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.53□□□□□ -2
FNDC9Q8TBE3 AC244098.2-201ENST00000422068 99 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 AC087499.2-201ENST00000432861 149 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 AC097499.1-201ENST00000444277 208 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 Z77249.1-201ENST00000444622 1175 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 COX6CP2-201ENST00000444980 225 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 RPL7P59-201ENST00000447700 943 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.53□□□□□ -2
FNDC9Q8TBE3 RPL21P41-201ENST00000459863 264 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.53□□□□□ -2
FNDC9Q8TBE3 RPL23AP55-201ENST00000498163 452 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.53□□□□□ -2
FNDC9Q8TBE3 AC016065.2-201ENST00000514530 444 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 SNORD59.2-201ENST00000516873 68 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 SNORA31.26-201ENST00000517250 137 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.53□□□□□ -2
FNDC9Q8TBE3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.53□□□□□ -2
FNDC9Q8TBE3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.53□□□□□ -2
FNDC9Q8TBE3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.53□□□□□ -2
FNDC9Q8TBE3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.53□□□□□ -2
FNDC9Q8TBE3 AL157394.1-201ENST00000562983 1224 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
FNDC9Q8TBE3 ELOCP29-201ENST00000588193 334 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 AC107871.2-201ENST00000612894 502 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 AL390240.1-201ENST00000612950 384 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 Z99129.2-201ENST00000619967 314 ntBASIC2.53□□□□□ -2
FNDC9Q8TBE3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
FNDC9Q8TBE3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.53□□□□□ -2
FNDC9Q8TBE3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
FNDC9Q8TBE3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
FNDC9Q8TBE3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
FNDC9Q8TBE3 AL161431.1-201ENST00000618966 4205 ntBASIC2.52□□□□□ -2.01
FNDC9Q8TBE3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
FNDC9Q8TBE3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
FNDC9Q8TBE3 METTL21EP-201ENST00000298105 713 ntBASIC2.52□□□□□ -2.01
FNDC9Q8TBE3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
FNDC9Q8TBE3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
FNDC9Q8TBE3 RNU1-35P-201ENST00000362782 153 ntBASIC2.52□□□□□ -2.01
FNDC9Q8TBE3 U8.9-201ENST00000365667 134 ntBASIC2.52□□□□□ -2.01
FNDC9Q8TBE3 RNU6-40P-201ENST00000384254 107 ntBASIC2.52□□□□□ -2.01
FNDC9Q8TBE3 MIR512-1-201ENST00000384913 84 ntBASIC2.52□□□□□ -2.01
FNDC9Q8TBE3 VTA1P1-201ENST00000414044 866 ntBASIC2.52□□□□□ -2.01
FNDC9Q8TBE3 RPL7P10-201ENST00000417407 739 ntBASIC2.52□□□□□ -2.01
FNDC9Q8TBE3 AC005517.2-201ENST00000424673 553 ntBASIC2.52□□□□□ -2.01
FNDC9Q8TBE3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
FNDC9Q8TBE3 TRIM60P18-201ENST00000441518 828 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms