Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 RNA5SP219-201ENST00000390940 113 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 MIR1298-201ENST00000408783 112 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 RNU6-1203P-201ENST00000410703 110 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 RNU2-25P-201ENST00000411041 191 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 RPL36AP36-201ENST00000418616 301 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 AL590632.1-201ENST00000424289 371 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 AL139148.1-201ENST00000427122 680 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 RPL23AP69-201ENST00000431134 458 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 AC073410.1-201ENST00000435125 589 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 AC005532.2-201ENST00000467154 373 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 AL049830.2-201ENST00000480072 201 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 RN7SL809P-201ENST00000482040 297 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 AC026801.1-201ENST00000497178 464 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 AC105384.2-201ENST00000508433 640 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 RNU2-10P-201ENST00000516375 211 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 HMGN1P28-201ENST00000521340 364 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 LARP7P2-201ENST00000575306 125 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 AL159972.1-201ENST00000625150 448 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 AC068870.1-201ENST00000563737 2455 ntBASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 AC009779.8-201ENST00000641684 4384 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 RNA5SP326-201ENST00000363209 110 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 RNU4-42P-201ENST00000364738 142 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 CYCSP51-201ENST00000443545 318 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 RPS15AP1-201ENST00000457423 391 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 RN7SL172P-201ENST00000460535 303 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 AC097486.1-201ENST00000515331 210 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 RNU6-615P-201ENST00000516065 106 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 CYCSP28-201ENST00000534284 321 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 AP002392.1-201ENST00000537692 208 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 MIR5692C1-201ENST00000585309 91 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 AC025857.2-201ENST00000602711 238 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 AC093799.2-201ENST00000610062 578 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 AL159153.1-201ENST00000619688 317 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 AC021753.1-201ENST00000635724 168 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 AC027287.1-201ENST00000553115 1453 ntBASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
NKX2-3Q8TAU0 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 RNU5A-8P-201ENST00000364102 114 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 RNU6-611P-201ENST00000384276 104 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 RN7SKP126-201ENST00000411143 300 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 RNU2-6P-201ENST00000411404 190 ntBASIC6.75□□□□□ -1.33
NKX2-3Q8TAU0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms