Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 MTCO3P13-201ENST00000577757 781 ntBASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 AP001029.3-201ENST00000588063 596 ntBASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 AC113368.1-201ENST00000603736 382 ntBASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 AL627309.6-201ENST00000606857 840 ntBASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 AL021368.1-201ENST00000607490 540 ntBASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 AL355493.4-201ENST00000618530 292 ntBASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 AC091046.2-201ENST00000620775 665 ntBASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 AC006111.3-201ENST00000622137 383 ntBASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 AP000676.4-201ENST00000624659 623 ntBASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 HPVC1-201ENST00000629899 1198 ntBASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 AL163152.1-201ENST00000642001 374 ntBASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SMARCD3Q6STE5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 RNU6-98P-201ENST00000384173 107 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 RNU4-31P-201ENST00000384211 141 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 MTCO3P4-201ENST00000419236 787 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 FAM204CP-201ENST00000424489 642 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 MTND2P21-201ENST00000436242 1042 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 RPL23AP58-201ENST00000440453 469 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 RPL39P40-201ENST00000445481 146 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 HMGB1P25-201ENST00000468402 607 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 SYPL1P1-201ENST00000473622 768 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 RN7SL297P-201ENST00000483161 293 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 SNORA9.3-201ENST00000516383 129 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 POLR2KP1-201ENST00000553226 168 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AL731537.2-201ENST00000561565 951 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AC074050.1-201ENST00000563247 211 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AC007179.3-201ENST00000604976 235 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AL359535.1-201ENST00000612100 1087 ntBASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.59□□□□□ -1.99
SMARCD3Q6STE5 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.59□□□□□ -2
SMARCD3Q6STE5 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMARCD3Q6STE5 RNU6-851P-201ENST00000384565 107 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 RNU4-65P-201ENST00000410473 140 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 RNA5SP492-201ENST00000411330 114 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.58□□□□□ -2
SMARCD3Q6STE5 KRR1P1-201ENST00000419430 803 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.58□□□□□ -2
SMARCD3Q6STE5 XKRY2-201ENST00000442362 1093 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 Z77249.1-201ENST00000444622 1175 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.58□□□□□ -2
SMARCD3Q6STE5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC010301.1-201ENST00000473936 355 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC087879.1-201ENST00000474343 374 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 SUMO1P1-201ENST00000497904 306 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 CAB39P1-201ENST00000502277 460 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC098799.2-201ENST00000509466 868 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC008494.2-201ENST00000514544 370 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 HMGB1P46-201ENST00000520062 610 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.58□□□□□ -2
SMARCD3Q6STE5 HPRT1P3-201ENST00000539521 576 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.58□□□□□ -2
SMARCD3Q6STE5 DUXAP4-201ENST00000603046 613 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 AL009028.1-201ENST00000604895 802 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 AC124312.4-201ENST00000605533 310 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 CR589904.2-201ENST00000612533 440 ntBASIC2.58□□□□□ -2
SMARCD3Q6STE5 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMARCD3Q6STE5 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.58□□□□□ -2
SMARCD3Q6STE5 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.58□□□□□ -2
SMARCD3Q6STE5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms