Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.16□□□□□ -1.58
CNKSR3Q6P9H4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.16□□□□□ -1.58
CNKSR3Q6P9H4 AC026634.1-201ENST00000634369 198 ntBASIC5.16□□□□□ -1.58
CNKSR3Q6P9H4 ZNF137P-201ENST00000456718 1920 ntBASIC5.16□□□□□ -1.58
CNKSR3Q6P9H4 AL731566.1-201ENST00000620490 1937 ntBASIC5.16□□□□□ -1.58
CNKSR3Q6P9H4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNKSR3Q6P9H4 AP000473.2-201ENST00000602659 1537 ntBASIC5.16□□□□□ -1.58
CNKSR3Q6P9H4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CNKSR3Q6P9H4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CNKSR3Q6P9H4 AP005435.3-201ENST00000531260 3198 ntBASIC5.16□□□□□ -1.58
CNKSR3Q6P9H4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNKSR3Q6P9H4 AL022311.1-201ENST00000623726 19416 ntBASIC5.16□□□□□ -1.58
CNKSR3Q6P9H4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CNKSR3Q6P9H4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNKSR3Q6P9H4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNKSR3Q6P9H4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.15□□□□□ -1.58
CNKSR3Q6P9H4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNKSR3Q6P9H4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNKSR3Q6P9H4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNKSR3Q6P9H4 RNA5SP388-201ENST00000362584 119 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 Y_RNA.184-201ENST00000363884 108 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 SNORA4.3-201ENST00000365564 137 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 SNORD42.2-201ENST00000365570 69 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 Y_RNA.422-201ENST00000384054 114 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 RPS4XP8-201ENST00000402039 771 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 RNU6-373P-201ENST00000411247 98 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 OR1AA1P-201ENST00000419597 916 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 NANOGP6-201ENST00000429190 847 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 MTND6P18-201ENST00000439477 513 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 CBX1P1-201ENST00000440184 427 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 H2AFZP5-201ENST00000446960 382 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 RPL23AP24-201ENST00000458203 385 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 AC130509.1-201ENST00000464158 433 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 ST13P14-201ENST00000474095 734 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 AC021146.2-201ENST00000504736 556 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 AC007016.1-201ENST00000512110 244 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 AC026402.1-201ENST00000513642 170 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 SNRPGP17-201ENST00000603780 214 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 AL359999.1-201ENST00000604513 294 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNKSR3Q6P9H4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AL445437.1-201ENST00000623157 3087 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 SNORA69-201ENST00000383895 132 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 Y_RNA.579-201ENST00000390939 94 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AL121972.1-201ENST00000402023 252 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 TXNP7-201ENST00000406296 293 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 RN7SKP140-201ENST00000411196 284 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 MRPL50P2-201ENST00000416821 482 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 RPS26P47-201ENST00000427219 348 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 OR51AB1P-201ENST00000429046 620 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 BX276092.6-201ENST00000430476 250 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AL606489.2-201ENST00000433886 234 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AL451139.1-201ENST00000434718 346 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AC006480.1-201ENST00000449887 378 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AC079168.2-201ENST00000453977 416 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 BX276092.8-201ENST00000455722 250 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 SNORD19B-201ENST00000459623 84 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AC091153.1-201ENST00000466297 402 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AC016559.2-201ENST00000510759 359 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 RNU6-709P-201ENST00000517257 104 ntBASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.14□□□□□ -1.59
CNKSR3Q6P9H4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms