Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 RNA5SP281-201ENST00000516504 135 ntBASIC1.46□□□□□ -2.18
UBR4Q5T4S7 AC008638.3-201ENST00000603341 463 ntBASIC1.46□□□□□ -2.18
UBR4Q5T4S7 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 RNU4-74P-201ENST00000411280 161 ntBASIC1.46□□□□□ -2.18
UBR4Q5T4S7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 FCF1P1-201ENST00000432690 571 ntBASIC1.46□□□□□ -2.18
UBR4Q5T4S7 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 AC126121.1-201ENST00000482313 553 ntBASIC1.46□□□□□ -2.18
UBR4Q5T4S7 OR5H3P-201ENST00000502817 919 ntBASIC1.46□□□□□ -2.18
UBR4Q5T4S7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 Y_RNA.559-201ENST00000384686 107 ntBASIC1.46□□□□□ -2.18
UBR4Q5T4S7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 NPM1P28-201ENST00000492269 840 ntBASIC1.46□□□□□ -2.18
UBR4Q5T4S7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.46□□□□□ -2.18
UBR4Q5T4S7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 U3.40-201ENST00000408706 208 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 RPS21P8-201ENST00000413365 247 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AC093524.1-201ENST00000564266 1094 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 uc_338.32-201ENST00000615087 172 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 MTND5P24-201ENST00000438892 1767 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 SAGE4P-201ENST00000442271 3381 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 USP9YP33-201ENST00000412220 421 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AIMP1P1-201ENST00000418670 937 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 USP9YP35-201ENST00000435696 412 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AC114801.2-201ENST00000503825 781 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 NPM1P49-201ENST00000448027 714 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 BTG4P1-201ENST00000510421 183 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AL391156.1-201ENST00000554965 554 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AC010928.3-201ENST00000587712 541 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AC068313.1-201ENST00000604028 1008 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 RNA5SP380-201ENST00000517190 98 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AC138832.1-201ENST00000522871 556 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AL137100.2-201ENST00000555786 315 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 CYP2C60P-201ENST00000566088 139 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.45□□□□□ -2.18
UBR4Q5T4S7 BNIP3P38-201ENST00000601117 544 ntBASIC1.45□□□□□ -2.18
UBR4Q5T4S7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 Y_RNA.85-201ENST00000363014 111 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 IFNNP1-201ENST00000429219 553 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 RPS7P2-201ENST00000435134 607 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 MLLT10P2-201ENST00000506434 249 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 SNORA35B-201ENST00000607417 129 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms