Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC105129.1-201ENST00000560250 297 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 RN7SL176P-201ENST00000580352 264 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AC090970.3-201ENST00000612566 866 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AL049536.1-201ENST00000625043 744 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 AC110994.2-201ENST00000635481 492 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 OR56B2P-202ENST00000641377 2453 ntBASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CCDC144BQ3MJ40 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AL359922.3-201ENST00000624779 1670 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AL365440.1-201ENST00000436135 2167 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 Y_RNA.3-201ENST00000362331 103 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 RNU1-20P-201ENST00000363314 162 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 RNY4P34-201ENST00000364779 95 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 RNA5SP479-201ENST00000364858 117 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 RNU6-1215P-201ENST00000384441 102 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 RN7SKP267-201ENST00000410381 285 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 Y_RNA.599-201ENST00000410489 109 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 MTCO1P21-201ENST00000416634 589 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 MTCO3P12-201ENST00000416718 547 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC004975.1-201ENST00000428733 208 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC009961.2-201ENST00000435771 251 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 RPL35AP22-201ENST00000436855 335 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 CBX1P1-201ENST00000440184 427 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 TMED11P-201ENST00000479478 690 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC123904.2-201ENST00000548059 300 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC009063.1-201ENST00000563342 702 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC093249.4-201ENST00000564755 259 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC084783.1-201ENST00000565846 910 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC004908.2-201ENST00000609090 574 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AL355472.4-201ENST00000610233 626 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC008121.2-201ENST00000614647 523 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC068792.1-201ENST00000621354 417 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC140113.4-201ENST00000622087 222 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 AC244258.1-201ENST00000637553 1071 ntBASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC144BQ3MJ40 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC144BQ3MJ40 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.56
CCDC144BQ3MJ40 AC107068.1-201ENST00000563286 4218 ntBASIC5.34□□□□□ -1.56
CCDC144BQ3MJ40 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 Y_RNA.619-201ENST00000410951 90 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AF274854.1-201ENST00000413236 615 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 OR5BE1P-201ENST00000425977 939 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 RPS17P13-201ENST00000448974 407 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 NUTF2P7-201ENST00000453086 375 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AC079168.2-201ENST00000453977 416 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AC011276.1-201ENST00000469688 323 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 RN7SL41P-201ENST00000476144 297 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 RPL7P23-201ENST00000493874 747 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AL358832.1-201ENST00000497800 389 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 RNU2-46P-201ENST00000517038 113 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 RNU6-430P-201ENST00000517078 107 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 FKBP1BP1-201ENST00000553366 325 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AC010546.1-201ENST00000569391 485 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AC012182.1-201ENST00000570133 895 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AC099489.2-201ENST00000574976 260 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms