Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 MIR4504-201ENST00000577413 92 ntBASIC2.54□□□□□ -2
HOXC5Q00444 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.54□□□□□ -2
HOXC5Q00444 AC024153.1-201ENST00000603103 365 ntBASIC2.54□□□□□ -2
HOXC5Q00444 AC242628.1-201ENST00000606810 391 ntBASIC2.54□□□□□ -2
HOXC5Q00444 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HOXC5Q00444 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.54□□□□□ -2
HOXC5Q00444 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
HOXC5Q00444 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.54□□□□□ -2
HOXC5Q00444 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.53□□□□□ -2
HOXC5Q00444 PABPC1P7-201ENST00000413177 1513 ntBASIC2.53□□□□□ -2
HOXC5Q00444 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.53□□□□□ -2
HOXC5Q00444 AC103988.1-201ENST00000566382 2177 ntBASIC2.53□□□□□ -2
HOXC5Q00444 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.53□□□□□ -2
HOXC5Q00444 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.53□□□□□ -2
HOXC5Q00444 RNU6-1243P-201ENST00000364028 107 ntBASIC2.53□□□□□ -2
HOXC5Q00444 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.53□□□□□ -2
HOXC5Q00444 RNU6-851P-201ENST00000384565 107 ntBASIC2.53□□□□□ -2
HOXC5Q00444 SNORA48.5-201ENST00000391143 135 ntBASIC2.53□□□□□ -2
HOXC5Q00444 RNU2-71P-201ENST00000411395 189 ntBASIC2.53□□□□□ -2
HOXC5Q00444 AC073264.1-201ENST00000411508 416 ntBASIC2.53□□□□□ -2
HOXC5Q00444 AL512504.1-201ENST00000415494 778 ntBASIC2.53□□□□□ -2
HOXC5Q00444 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.53□□□□□ -2
HOXC5Q00444 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.53□□□□□ -2
HOXC5Q00444 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.53□□□□□ -2
HOXC5Q00444 AL139132.1-201ENST00000431587 344 ntBASIC2.53□□□□□ -2
HOXC5Q00444 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.53□□□□□ -2
HOXC5Q00444 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.53□□□□□ -2
HOXC5Q00444 RPL23AP20-201ENST00000447965 421 ntBASIC2.53□□□□□ -2
HOXC5Q00444 OR6K1P-201ENST00000456766 971 ntBASIC2.53□□□□□ -2
HOXC5Q00444 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.53□□□□□ -2
HOXC5Q00444 KC877373.1-201ENST00000479066 408 ntBASIC2.53□□□□□ -2
HOXC5Q00444 TBCAP3-201ENST00000512475 312 ntBASIC2.53□□□□□ -2
HOXC5Q00444 SNORA9.3-201ENST00000516383 129 ntBASIC2.53□□□□□ -2
HOXC5Q00444 AL442163.2-201ENST00000553912 710 ntBASIC2.53□□□□□ -2
HOXC5Q00444 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.53□□□□□ -2
HOXC5Q00444 MIR3605-201ENST00000583214 100 ntBASIC2.53□□□□□ -2
HOXC5Q00444 CBX3P2-202ENST00000583365 535 ntBASIC2.53□□□□□ -2
HOXC5Q00444 MIR5195-201ENST00000583555 115 ntBASIC2.53□□□□□ -2
HOXC5Q00444 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.53□□□□□ -2
HOXC5Q00444 AC006023.2-201ENST00000609916 167 ntBASIC2.53□□□□□ -2
HOXC5Q00444 AC231759.1-201ENST00000616455 597 ntBASIC2.53□□□□□ -2
HOXC5Q00444 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
HOXC5Q00444 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.53□□□□□ -2
HOXC5Q00444 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.53□□□□□ -2
HOXC5Q00444 U6.107-201ENST00000637108 79 ntBASIC2.53□□□□□ -2
HOXC5Q00444 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.53□□□□□ -2
HOXC5Q00444 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.53□□□□□ -2
HOXC5Q00444 AL136164.4-201ENST00000625013 2135 ntBASIC2.53□□□□□ -2.01
HOXC5Q00444 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
HOXC5Q00444 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
HOXC5Q00444 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC5Q00444 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC5Q00444 RNU6-374P-201ENST00000364146 108 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXC5Q00444 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC5Q00444 UBA52P6-201ENST00000399822 382 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXC5Q00444 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC5Q00444 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 RSL24D1P3-201ENST00000449255 495 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 MRPL35P4-201ENST00000453682 566 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 RPL5P24-201ENST00000463742 885 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 HMGB1P25-201ENST00000468402 607 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 SYPL1P1-201ENST00000473622 768 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 AC017015.1-201ENST00000477387 286 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 AC090525.1-201ENST00000479116 478 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC5Q00444 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC5Q00444 AC098799.2-201ENST00000509466 868 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXC5Q00444 IGKV2D-36-201ENST00000518643 226 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 AC025881.1-201ENST00000518851 512 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC5Q00444 AC109635.4-202ENST00000531666 412 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC5Q00444 CR383656.14-201ENST00000551951 406 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 SERPINE4P-201ENST00000554978 281 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 AC107954.1-201ENST00000565906 727 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.52□□□□□ -2.01
HOXC5Q00444 MIR3670-2-201ENST00000582974 65 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 MIR3670-1-201ENST00000584160 65 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 MIR3670-3-201ENST00000584855 65 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXC5Q00444 OR4G1P-201ENST00000588632 938 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 AL109653.1-201ENST00000603091 248 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 AL009028.1-201ENST00000604895 802 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 MIR3670-4-201ENST00000612260 65 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXC5Q00444 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXC5Q00444 AC096644.4-201ENST00000563417 2912 ntBASIC2.52□□□□□ -2.01
HOXC5Q00444 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.51□□□□□ -2.01
HOXC5Q00444 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.51□□□□□ -2.01
HOXC5Q00444 AC073346.2-201ENST00000624724 2058 ntBASIC2.51□□□□□ -2.01
HOXC5Q00444 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HOXC5Q00444 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXC5Q00444 METTL21EP-201ENST00000298105 713 ntBASIC2.51□□□□□ -2.01
HOXC5Q00444 MIR26A1-201ENST00000362205 77 ntBASIC2.51□□□□□ -2.01
HOXC5Q00444 RNU1-112P-201ENST00000364401 164 ntBASIC2.51□□□□□ -2.01
HOXC5Q00444 DEFB109C-201ENST00000382575 264 ntBASIC2.51□□□□□ -2.01
HOXC5Q00444 DEFB109B-201ENST00000382656 264 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms